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Expression data from wild-type mice starved as compared to wild-type control mice

ABSTRACT: In order to identify the effects of starvation on the liver transcriptome, we performed Affymetrix Gene-Chip hybridization experiments for the starved mice Transcriptome analysis of the starved mice

ORGANISM(S): Mus musculus

PROVIDER: GSE36510 | GEO | 2013/04/20

SECONDARY ACCESSION(S): PRJNA153463

REPOSITORIES: GEO

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Expression data from wild-type mice starved as compared to wild-type control mice

Project description:In order to identify the effects of starvation on the liver transcriptome, we performed Affymetrix Gene-Chip hybridization experiments for the starved mice Transcriptome analysis of the starved mice For the analysis on the starved mice,total RNA was extracted from the liver of two mice; RNA extracted from the liver of two wt mice was used as control.

2013-04-20 | E-GEOD-36510 | biostudies-arrayexpress

Expression data from MEFs wt cells starved as compared to MEFs wt cells grown in Normal Medium

2015-02-24 | GSE56671 | GEO

Expression data from PPP3R1 cell line starved as compared to PPP3R1 cell line grown in Normal Medium

2015-02-24 | GSE56672 | GEO

Expression data from MEFs wt cells starved as compared to MEFs wt cells grown in Normal Medium

Project description:In order to identify the effects of starvation on the MEFs wt trascriptome, we performed Affymetrix Gene-Chip hybridization experiments for the starved cells Transcriptome analysis of the starved MEFs wt cells For the analysis on the starved MEFs wt cells, total RNA was extracted; RNA extracted from MEFs wt cells grown in Normal Medium was used as control

2015-02-24 | E-GEOD-56671 | biostudies-arrayexpress

Expression data from PPP3R1 cell line starved as compared to PPP3R1 cell line grown in Normal Medium

Project description:In order to identify the effects of starvation on the PPP3R1 cell line trascriptome, we performed Affymetrix Gene-Chip hybridization experiments for the starved cells Transcriptome analysis of the starved PPP3R1 cell line For the analysis on the starved PPP3R1 cell line, total RNA was extracted; RNA extracted from PPP3R1 cell line grown in Normal Medium was used as control

2015-02-24 | E-GEOD-56672 | biostudies-arrayexpress

Transcriptome of wild type N2 worms at embronic stage and starved L1 stage

Project description:Transcription factors are key components of regulatory networks that control development, as well as the response to environmental stimuli. We have established an experimental pipeline in C. elegans that permits global identification of the binding sites for transcription factors using chromatin immunoprecipitation and deep sequencing. We describe and validate this strategy, and apply it to the transcription factor PHA-4, which plays critical roles in organ development and starvation stress response. We defined binding sites for PHA-4 during formation of the embryonic pharynx, and in starved larvae. PHA-4 binds to thousands of locations throughout the genome. These sites shift dramatically between embryos and larvae, from developmentally regulated genes to genes involved in metabolism. We acquired transcriptome of wild type N2 worms at embyonic and starved L1 stages using RNA-seq method in comparing to the ChIP-seq experiment to study transcription factor binding. The wild type worms were cultured the same as the transgenic worms for transcription factor binding experiment. Keywords: Transcriptome Analysis For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf

2009-06-11 | GSE16552 | GEO

Transcriptome of wild type N2 worms at embronic stage and starved L1 stage

2009-06-11 | E-GEOD-16552 | biostudies-arrayexpress

Gene expression in brain and antennae of starved and fed Drosophilla adult

Project description:We found in our behavior experiment clearly distinnct olfactory responses in fed vs starved flies in response to differrent odors.To investigate the molecular basis of the starvation mediated olfactory modulation process, we compared gene expression at the level of the antenna and the brain for fed and starved flies.

2013-06-20 | GSE48077 | GEO

Hypoxia serum starved Flt-1 wild type and Flt-1 heterozygote BMDMs

Project description:The goal is to identify differential gene expression between hypoxia serum starved (for 6 hours) Flt-1+/+ (wild type) and Flt-1+/- (VEGFR1 heterozygote) bone marrow derived macrophages

2019-06-30 | GSE116538 | GEO

Genome-wide analysis of serum starved prelamin A-accumulating hMSCs gene expression.

Project description:Analysis of serum starved prelamin A-accumulating hMSCs at gene expression level. The hypothesis tested in the present study was that prelamin A accumulation induces the dysregulation of genes that are essensial for cell survival under a stress condition such as serum starvation. The results provide important information about these genes and the functional categories that are dysregulated due to prelamin A accumulation in serum starved hMSCs.

2014-06-23 | GSE52563 | GEO

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