Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Continuous gene expression profile of root at nighttime throughout the entire growth of rice in the field

ABSTRACT: A continuous gene expression profiling of roots was performed during nighttime at regular interval from transplanting until harvesting to characterize the transcriptional and physiological changes in the root system of rice throughout the entire growth under natural field conditions.

ORGANISM(S): Oryza sativa Oryza sativa Japonica Group

PROVIDER: GSE39425 | GEO | 2012/12/03

SECONDARY ACCESSION(S): PRJNA170873

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Continuous gene expression profile of leaf at nighttime throughout the entire growth of rice in the field

2012-12-03 | GSE36042 | GEO

Continuous gene expression profile of root at nighttime throughout the entire growth of rice in the field

Project description:A continuous gene expression profiling of roots was performed during nighttime at regular interval from transplanting until harvesting to characterize the transcriptional and physiological changes in the root system of rice throughout the entire growth under natural field conditions. Roots were sampled at nighttime (24:00) at 7-day intervals encompassing 14 different growth stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.

2012-12-03 | E-GEOD-39425 | biostudies-arrayexpress

Continuous gene expression profile of leaf at nighttime throughout the entire growth of rice in the field

Project description:A continuous gene expression profiling of leaves was performed during nighttime at regular interval from transplanting until harvesting to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant under natural field conditions. The uppermost fully-expanded leaf in the main stem corresponding to the 1st leaf until 83 days after transplanting (DAT) and the flag leaf from them on were sampled in two replicates at 12:00 midnight at 7- day intervals encompassing 17 different growth stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.

2012-12-03 | E-GEOD-36042 | biostudies-arrayexpress

Continuous gene expression profile of root at daytime throughout the entire growth of rice in the field

2012-12-03 | GSE39424 | GEO

Continuous gene expression profile of leaf throughout the entire growth in rice

2011-01-13 | GSE21397 | GEO

Continuous gene expression profile of leaf throughout the entire growth of rice in 2010

2013-07-20 | GSE39520 | GEO

Continuous gene expression profile of leaf throughout the entire growth in rice

Project description:A continuous gene expression profiling of leaves at regular interval from transplanting until harvesting was performed to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant. For continuous gene expression profile of leaf, the uppermost fully-expanded leaf, 1st leaf before 83 days after transplanting (DAT) and flag leaf from then on, in the main stem was sampled at 12:00 PM at regular intervals of 7 days encompassing 17 different growth stages with three replicates.

2011-01-13 | E-GEOD-21397 | biostudies-arrayexpress

Continuous gene expression profile of root at daytime throughout the entire growth of rice in the field

Project description:A continuous gene expression profiling of roots was performed during daytime at regular interval from transplanting until harvesting to characterize the transcriptional and physiological changes in the root system of rice throughout the entire growth under natural field conditions. Roots were sampled at daytime (12:00) at 7-day intervals encompassing 14 different growth stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.

2012-12-03 | E-GEOD-39424 | biostudies-arrayexpress

Diurnal and circadian gene expression profile of leaf throughout the entire growth of rice in the field

Project description:A continuous gene expression profiling of leaves was performed at regular interval during a 48-hr period in 9 different growth stages from transplanting until harvesting to characterize the diurnal and circadian gene expression profile of rice and to understand the transcriptional program and physiological state throughout entire the growth under natural field conditions.

2012-12-03 | GSE36040 | GEO

Continuous gene expression profile of leaf throughout the entire growth of rice in 2010

Project description:A continuous gene expression profiling of leaves at regular interval from transplanting until harvesting was performed to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant in 2010. For continuous gene expression profile of leaf, the uppermost fully-expanded leaf in the main stem was sampled at 12:00 PM at regular intervals of 7 days encompassing 17 different growth stages with three replicates during a normal rice growing season in 2010.

2013-07-20 | E-GEOD-39520 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data