Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [brain]

ABSTRACT: Genome wide DNA methylation profiling of 4 human tissues of various ages: 78 samples from Brodmann area 19 of the cerebral cortex.The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs. Sentrix barcode included for batch normalization

ORGANISM(S): Homo sapiens

PROVIDER: GSE49905 | GEO | 2013/08/16

SECONDARY ACCESSION(S): PRJNA215308

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [brain]

Project description:Genome wide DNA methylation profiling of 4 human tissues of various ages: 78 samples from Brodmann area 19 of the cerebral cortex.The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs. Sentrix barcode included for batch normalization 1ug of genomic DNA was bisulfite converted using EZ-96 DNA Methylation Kit from ZymoResearch, and hybridized to beadchips according to Illumina Infinium 27k Human DNA methylation standard procedures

2013-08-16 | E-GEOD-49905 | biostudies-arrayexpress

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [muscle]

2013-08-16 | GSE49908 | GEO

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [blood]

2013-08-16 | GSE49904 | GEO

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [kidney]

2013-08-16 | GSE49907 | GEO

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [muscle]

Project description:Genome wide DNA methylation profiling of 4 human tissues of various ages: 51 vastus lateralis samples.The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs. Sentrix barcode provided for batch normalization 500ng of genomic DNA was bisulfite converted using EZ-96 DNA Methylation Kit from ZymoResearch, and hybridized to beadcheaps according to Illumina Infinium 27k Human DNA methylation standard procedures.

2013-08-16 | E-GEOD-49908 | biostudies-arrayexpress

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [kidney]

Project description:Genome wide DNA methylation profiling of 4 human tissues of various ages: 83 samples of normal adjacent resected kidney tissue .The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs. Sentrix barcode provided for batch normalization 1ug of genomic DNA was bisulfite converted using EZ-96 DNA Methylation Kit from ZymoResearch, and hybridized to beadcheaps according to Illumina Infinium 27k Human DNA methylation standard procedures

2013-08-16 | E-GEOD-49907 | biostudies-arrayexpress

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape [blood]

Project description:Genome wide DNA methylation profiling of 4 human tissues of various ages: 71 human buffy coat samples. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs. Sentrix barcode provided for batch correction Buffy coats obtained from Conversant Bio and genomic DNAs isolated by Agencourt Genfind v2; 1ug of genomic DNA was bisulfite converted using EZ-96 DNA Methylation Kit from ZymoResearch; samples hybridized to beadchips according to Illumina Infinium 27k Human DNA methylation standard procedures

2013-08-16 | E-GEOD-49904 | biostudies-arrayexpress

Epigenome analysis of primary MCL

Project description:Genome wide DNA methylation profiling of primary MCL. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs.

2015-12-31 | GSE45253 | GEO

Epigenome analysis of placenta samples from newborns

Project description:Genome wide DNA methylation profiling of placenta samples from 48 newborns. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs.

2012-03-29 | GSE36829 | GEO

Epigenome analysis of cord blood samples from newborns

Project description:Genome wide DNA methylation profiling of cord blood samples from 48 newborns. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs.

2012-03-29 | GSE36812 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data