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Validation experiment of copy number variations identified by next-generation sequencing in chickens (part 2)

ABSTRACT: Copy number variation (CNV) is important and widespread in the genome, and is a major cause of disease and phenotypic diversity. Herein, we perform a genome-wide analysis of CNVs in the 12 diversified chicken genomes based on next-generation sequencing. We apply aCGH experiments to confirm our predicted CNVs. Results from aCGH agree well with our findings and the Pearson’s correlation values between the test and reference samples range from 0.644 to 0.722.

ORGANISM(S): Gallus gallus

PROVIDER: GSE54118 | GEO | 2015/05/14

SECONDARY ACCESSION(S): PRJNA235207

REPOSITORIES: GEO

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Validation experiment of copy number variations identified by next-generation sequencing in chickens (part 1)

2015-05-14 | GSE54117 | GEO

Validation experiment of copy number variations identified by next-generation sequencing in chickens (part 2)

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