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HPL-2 in N2 (wild-type) early embryo

ABSTRACT: ChIP-chip of HPL-2 in N2 C. elegans early embryo

ORGANISM(S): Caenorhabditis elegans

PROVIDER: GSE58762 | GEO | 2014/10/11

SECONDARY ACCESSION(S): PRJNA253398

REPOSITORIES: GEO

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HPL-2 in N2 (wild-type) early embryo

Project description:ChIP-chip of HPL-2 in N2 C. elegans early embryo EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: N2; Developmental Stage: Early Embryo; Genotype: wild type; Sex: population predominantly Hermaphrodites perhaps with some Males; NUMBER OF REPLICATES: 3; EXPERIMENTAL FACTORS: temperature 20

2014-10-11 | E-GEOD-58762 | biostudies-arrayexpress

HPL-2 in PFR40 (hpl-2) early embryo

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HPL-2 in PFR40 (hpl-2) early embryo

Project description:ChIP-chip of HPL-2 in hpl-2 C. elegans early embryo EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: PFR40; Developmental Stage: Early Embryo; Genotype: hpl-2(tm1489); Sex: population predominantly Hermaphrodites perhaps with some Males; NUMBER OF REPLICATES: 1; EXPERIMENTAL FACTORS: temperature 20

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Expression profiling in PFR40 (hpl-2) mutant early embryo

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HPL-2 in GW638 (met-2 set-25) MxEmb

Project description:ChIP-chip of HPL-2 in met-2 set-25 C. elegans mixed-stage embryo EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: GW638; Developmental Stage: Mixed-stage Embryo; Genotype: met-2(n4256) set-25(n5021); Sex: population predominantly Hermaphrodites perhaps with some Males; NUMBER OF REPLICATES: 2; EXPERIMENTAL FACTORS: temperature 20

2014-10-11 | E-GEOD-58761 | biostudies-arrayexpress

Strome Mes-4, H3K36me3 and H3K27me3 in N2 EEMB

Project description:ChIP-chip of Mes-4, H3K36me3 and H3K27me3 in N2 C. elegans early embryo

2012-05-30 | GSE38180 | GEO

Identification of Transcription Factor N2::POL II Binding Regions in Early Embryo

Project description:modENCODE_submission_2435 This submission comes from a modENCODE project of Michael Snyder. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We are identifying the DNA binding sites for 300 transcription factors in C. elegans. Each transcription factor gene is tagged with the same GFP fusion protein, permitting validation of the gene's correct spatio-temporal expression pattern in transgenic animals. Chromatin immunoprecipitation on each strain is peformed using an anti-GFP antibody, and any bound DNA is deep-sequenced using Solexa GA2 technology. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf EXPERIMENT TYPE: CHIP-seq. BIOLOGICAL SOURCE: Strain: N2(genotype : wild type genotype : DR subclone of DB original (Tc1 pattern I) official name : N2 ); Developmental Stage: early embryo; Genotype: wild type; Sex: Hermaphrodite; EXPERIMENTAL FACTORS: Developmental Stage early embryo; Target gene ama-1; Strain N2(genotype : wild type genotype : DR subclone of DB original (Tc1 pattern I) official name : N2 ); temp (temperature) 20 degree celsius Series_type: CHIP-seq

2011-02-18 | E-GEOD-25788 | biostudies-arrayexpress

Transcriptome analysis of hpl-2(tm1489) vs wild-type worms at mixed embryonic and third larval stages

Project description:Epigenetic factors guide cell fate decisions and can stabilize development by buffering environmental variation. HP1 proteins have a well-characterized role in heterochromatin packaging and gene regulation, while their function in organismal development is less well understood. Here we used genome-wide expression profiling to assess novel functions of the C. elegans HP1 homologue HPL-2 at specific developmental stages RNA was extracted from either mixed-stage embryos or from third larval stage worms for both wild-type N2 (Bristol) and hpl-2(tm1489) strains.

2011-11-30 | E-GEOD-33700 | biostudies-arrayexpress

Strome Mes-4, H3K36me3 and H3K27me3 in N2 EEMB

Project description:ChIP-chip of Mes-4, H3K36me3 and H3K27me3 in N2 C. elegans early embryo EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: N2; Developmental Stage: Early Embryo; Genotype: N2; Sex: population predominantly Hermaphrodites perhaps with some Males; NUMBER OF REPLICATES: 2 or 3; EXPERIMENTAL FACTORS: temperature 20

2012-05-29 | E-GEOD-38180 | biostudies-arrayexpress

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