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Differential Gene Expression of Phenazine biosynthesis-like domain-containing protein (PBLD) in HepG2 cells

ABSTRACT: Our objective was to elucidate patterns of gene expression underlying the PBLD overexpression in HepG2 cells. The transcript profiles of PBLD overexpressed HepG2 cells were compared to the gene expression profiles of HepG2 cells control.

ORGANISM(S): Homo sapiens

PROVIDER: GSE58930 | GEO | 2015/07/01

SECONDARY ACCESSION(S): PRJNA253942

REPOSITORIES: GEO

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Differential Gene Expression of Phenazine biosynthesis-like domain-containing protein (PBLD) in HepG2 cells

Project description:Our objective was to elucidate patterns of gene expression underlying the PBLD overexpression in HepG2 cells. The transcript profiles of PBLD overexpressed HepG2 cells were compared to the gene expression profiles of HepG2 cells control. Gene expression is compared at a global level using total RNA from PBLD overexpressed HepG2 cells and controls using the Illumina microarray platform.

2015-07-01 | E-GEOD-58930 | biostudies-arrayexpress

Expression analysis of HepG2, HepG2-slug and HepG2-slug on Matrigel

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2012-09-21 | E-GEOD-41026 | biostudies-arrayexpress

miRNAs expression in HepG2-HBx and HepG2-URG11

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Expression Profiles of HepG2 cells treated with 7 compounds

Project description:Expression Profiles of HepG2 cells treated with 7 compounds

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Project description:Mature microRNA expression profiling of HBx-expressing HepG2 cells versus Control cells under UV stress The mature microRNA expression profile of HBx-expressing HepG2 cells versus control cells in three independent biological repeated experiments. This study focuses only on human sequences. The complete data matrix is linked below as a supplementary file.

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Expression data from HepG2 cells before and after RNF43 knockdown

Project description:It has been demonstrated that Ring finger protein 43 (RNF43) is overexpressed in colorectal cancer and mediates cancer cell proliferation. We found that RNF43 was frequently overexpressed in HCC, and knockdown of RNF43 could induce apoptosis and inhibit proliferation, invasion, colony formation and xenograft growth of HCC cells. Suggesting that RNF43 is involved in tumorigenesis and progression of HCC. We used microarrays to profile gene expression patterns before and after RNF43 knockdown, and identified differentially expressed genes during this process. HepG2 cells were transfected with RNF43 siRNA or negative control siRNA in triplicate. Forty-eight hours after transfection, total RNA was extracted,labeled and hybridized to HG-U133 Plus 2.0 arrays.

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mRNA microarray analysis on HepG2 cells exposed to amorphous Silica Nanoparticles (SiO2-NP)

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ATAC-seq of HepG2 cells

Project description:ATAC-seq of HepG2 cells

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HBX-HepG2 versus Control-HepG2 (no UV)

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