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Deinococcus radiodurans R1 Cells: Control vs. bphPR deletion mutant

ABSTRACT: Transcriptional profiling of Deinococcus radiodurans comparing control wild type cells with bphPR deletion mutant

ORGANISM(S): Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

PROVIDER: GSE59135 | GEO | 2014/07/07

SECONDARY ACCESSION(S): PRJNA254481

REPOSITORIES: GEO

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Deinococcus radiodurans R1 Cells: Control vs. bphPR deletion mutant

Project description:Transcriptional profiling of Deinococcus radiodurans comparing control wild type cells with bphPR deletion mutant Two-condition experiment, R1 vs. bphPR deletion cell. Biological replicates: 3 control replicates, 3 bphPR deletion mutant replicates.

2014-07-07 | E-GEOD-59135 | biostudies-arrayexpress

Deinococcus radiodurans R1 Cells was treated with MMC (5 μg/ml) : Control treated with MMC (5 μg/ml) vs. bphPR deletion mutant treated with MMC (5 μg/ml)

Project description:Transcriptional profiling of Deinococcus radiodurans comparing control wild type cells with bphPR deletion mutant were treated with MMC (5 μg/ml)

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Deinococcus radiodurans R1 Cells was treated with MMC (5 M-NM-<g/ml) : Control treated with MMC (5 M-NM-<g/ml) vs. bphPR deletion mutant treated with MMC (5 M-NM-<g/ml)

Project description:Transcriptional profiling of Deinococcus radiodurans comparing control wild type cells with bphPR deletion mutant were treated with MMC (5 M-NM-<g/ml) Two-condition experiment, R1 MMC (5 M-NM-<g/ml) vs. bphPR deletion cell MMC (5 M-NM-<g/ml). Biological replicates: 3 control replicates, 3 bphPR deletion mutant replicates.

2014-07-07 | E-GEOD-59138 | biostudies-arrayexpress

Deinococcus radiodurans R1: wildtype strains vs. oxyR disruption strains

Project description:In Deinococcus radiodurans, a previously unreported special characteristic of DrOxyR (DR0615) is found with only one conserved cysteine. dr0615 gene mutant is hypersensitive to H2O2, but a little to ionizing radiation. Site-directed mutagenesis and subsequent in vivo functional analyses revealed that the conserved cysteine (C210) is necessary for sensing H2O2, but its mutation did not alter the binding characteristics of OxyR on DNA. Under oxidant stress, DrOxyR is oxidized to sulfenic acid form, which can be reduced by reducing reagents. In addition, quantitative real-time PCR and global transcription profile results showed that OxyR is not only a transcriptional activator (e.g., katE, drb0125), but also a transcriptional repressor (e.g., dps, mntH). Transcriptional profiling of comparing wildtype strains with oxyR disruption strains under normal growth conditions. Keywords: Genetic modification

2008-02-01 | GSE9636 | GEO

Deinococcus radiodurans R1

Project description:Deinococcus radiodurans R1 Cells: Control vs. bphPR deletion mutant

| PRJNA254481 | ENA

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Project description:Transcriptional profiling of comparing wildtype strains with DR0199-deletion strains under normal growth conditions.

2012-03-29 | GSE33758 | GEO

Deinococcus radiodurans R1: wildtype strains vs. DR1790-deletion strains

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Deinococcus radiodurans R1: rpob 9-bp-deletion vs. wild-type

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Project description:Transcriptional profiling of Deinococcus radiodurans comparing control untreated wild type cells with wild type cells treated with 100 µM CdCl2.

2010-02-27 | GSE20383 | GEO

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