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RNA-Seq in neurons from E16.5 mouse embryonic cortices from WT and SMCX KO mice

ABSTRACT: We conducted RNA-Seq (using Direct Ligation of Adapters to first strand cDNA) in neurons from E16.5 mouse embryonic cortices from WT and SMCX KO mice and harvested after 10 days in vitro culture.

ORGANISM(S): Mus musculus

PROVIDER: GSE61024 | GEO | 2016/01/27

SECONDARY ACCESSION(S): PRJNA260121

REPOSITORIES: GEO

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RNA-Seq in neurons from E16.5 mouse embryonic cortices from WT and SMCX KO mice

Project description:We conducted RNA-Seq (using Direct Ligation of Adapters to first strand cDNA) in neurons from E16.5 mouse embryonic cortices from WT and SMCX KO mice and harvested after 10 days in vitro culture. We sequenced RNA samples after 10 days in vitro cultures in biological and technical duplicates. 4 RNA samples from WT and SMCX KO neurons. We also sequenced RNA samples from same neurons after stimulation with KCl for 60 mins. So a total of 8 RNA-Seq samples.

2016-01-27 | E-GEOD-61024 | biostudies-arrayexpress

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Project description:We conducted ChIP-Seq of H3K4 methylation in neurons isolated from E16.5 mouse embryonic cortices from WT and SMCX KO mice and harvested after 10 days in vitro culture.

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ChIP-Seq of H3K4 methylation in neurons isolated from E16.5 mouse embryonic cortices from WT and SMCX KO mice

Project description:We conducted ChIP-Seq of H3K4 methylation in neurons isolated from E16.5 mouse embryonic cortices from WT and SMCX KO mice and harvested after 10 days in vitro culture. We sequenced H3K4me1, H3K4me3 ChIP and Input samples from mouse embryonic cortical neurons cultured in vitro for 10 days. Experiments were performed in biological and technical duplicates.

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Mus musculus

Project description:RNA-Seq in neurons from E16.5 mouse embryonic cortices from WT and SMCX KO mice

| PRJNA260121 | ENA

RNA-seq of postnatal day 0 (P0) wild-type, Fezf2-/- cortices, and Fezf2-/-;Fezf2-EnR cortices

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