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Transcriptome profiling of DCP5 using strand-specific RNA-sequencing in Arabidopsis

ABSTRACT: Arabidopsis DCP5, a homolog of human RNA-associated protein 55, is a nessary component of eukaryotic processing bodies (P-bodies). knockdown mutant of dcp5-1 showed compromised RNA decapping activity and reduced P-body size. Here we profiled Arabidopsis transcriptome of roots, shoots, and inflorensences in Col-0 and DCP5-1 mutant using strand-specific RNA-sequencing. Our analysis identified a large number of DCP5-regulatd transcripts in Arabidopsis.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE61812 | GEO | 2018/09/01

REPOSITORIES: GEO

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