Transcriptomics

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Comparison of murine whole gene expression on ligand immobilized surfaces


ABSTRACT: For the studies of cell migration in various micro-environments, self-assembled monolayer surfaces presenting adhesive ligand, RGD peptide, were used for the assay. Presentation of RGD ligands was based on the immobilization reaction with alkanethiols on a gold surface. There were differences in cell morphology and migration according to the ligand affinity (linear vs. cyclic RGD) and manner of ligand presentation (dynamic vs. non-dynamic). In dynamic surface experiment, cells initially grown on the fibronectin-coated patterns were exposed to either linear or cyclic RGD while in non-dynamic surface experiment cells interacted with the immobilized RGD from the beginning. Goal was to compare how the affinity and spatio-temporal exposure of ligand affect the overall transcriptional profiling.

ORGANISM(S): Mus musculus

PROVIDER: GSE62304 | GEO | 2014/10/15

SECONDARY ACCESSION(S): PRJNA263805

REPOSITORIES: GEO

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