Transcriptomics

Dataset Information

39

Drosophila Imp iCLIP identifies an RNA assemblage co-ordinating F-actin formation


ABSTRACT: In this study, we employed a combination of RIP-seq and short- and long-wave iCLIP technologies to identify transcripts associated with cytoplasmic RNPs containing the RNA-binding protein Drosophila Imp. We also made a Imp knockdown vs luciferase control experiment. Overall design: Two biological iCLIP-seq, as well as two mRNAseq made on cells harvested on the same day. Two biological PAR-iCLIP-seq. Two biological RIP-seq, as well as two mRNAseq made on cells harvested on the same day. Three biological mRNAseq of imp dsRNA treated cells as well as three control mRNAseq of cells treated with Luciferase dsRNA.

REANALYSED by: GSE117217

INSTRUMENT(S): Illumina HiSeq 2000 (Drosophila melanogaster)

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Mireya Plass  

PROVIDER: GSE62997 | GEO |

SECONDARY ACCESSION(S): PRJNA266435

REPOSITORIES: GEO

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