Genome-wide profiling of short fragment-enriched RNA in HeLa cells subjected to exosome depletion by RNAi

ABSTRACT: To assay the effect of depletion of the RNA exosome on RNAs shorter than the standard length captured by RNA-seq (>200 nt), we created RNA-seq libraries using fragmented RNA and a linker-ligation-based protocol that does not deplete RNAs shorter than 200 nt. Note: these data relate to Figure 6E in Lubas, Andersen et al., Cell Reports 2014 (accepted)

ORGANISM(S): Homo sapiens

PROVIDER: GSE63496 | GEO | 2014/12/01

SECONDARY ACCESSION(S): PRJNA268059

REPOSITORIES: GEO