Genomics

Dataset Information

0

Haemophilus parasuis gene expression the in lung


ABSTRACT: Purpose: Identify differentially expressed genes in pig lung, compared to growth on chocolate agar plate. Methods: In order to study the gene expression at this location, we sequenced ex vivo and in vivo H. parasuis transcriptome using a metatranscriptomic approach. Gene expression was compared with conventional plate culture. Results: down-regulation of anabolic and catabolic pathways, coupled with up-regulation of membrane-related genes involved in carbon acquisition, iron binding and pathogenesis. Conclusions: This data sheds some light on the scarcely studied in vivo transcriptome of H. parasuis, revealing nutritional virulence as an adaptive strategy for host survival.

ORGANISM(S): Glaesserella parasuis str. Nagasaki

PROVIDER: GSE63851 | GEO | 2014/12/05

SECONDARY ACCESSION(S): PRJNA269254

REPOSITORIES: GEO

Similar Datasets

2011-06-28 | GSE30172 | GEO
2018-04-18 | GSE113252 | GEO
2012-12-11 | GSE42814 | GEO
2012-12-11 | E-GEOD-42814 | biostudies-arrayexpress
2012-11-10 | GSE34744 | GEO
2012-11-10 | E-GEOD-34744 | biostudies-arrayexpress
2011-06-28 | E-GEOD-30172 | biostudies-arrayexpress
2011-12-20 | GSE34544 | GEO
2014-04-02 | GSE56428 | GEO
| PRJEB2342 | ENA