Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression profile of HCT116 cells treated with TNF-α/IFN-ɣ, both TNF-α/IFN-ɣ and silibinin, and without treatment.

ABSTRACT: Expression profiling of HCT116 colon cancer cells with different treatments. Illumina HumanHT-12 V4.0 expression beadchip was used to obtain expression profiles across more than 31,000 annotated genes.

ORGANISM(S): Homo sapiens

PROVIDER: GSE64131 | GEO | 2015/12/31

SECONDARY ACCESSION(S): PRJNA270234

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Expression profile of HCT116 cells treated with TNF-Î±/IFN-É£, both TNF-Î±/IFN-É£ and silibinin, and without treatment.

Project description:Expression profiling of HCT116 colon cancer cells with different treatments. Illumina HumanHT-12 V4.0 expression beadchip was used to obtain expression profiles across more than 31,000 annotated genes. Total RNA obtained from HCT116 cells with different treatments, namely, cells with TNF-Î± (50ng/ml)/IFN-É£ (50U/ml) treatment, cells with TNF-Î± (50 ng/ml)/IFN-É£ (50 U/ml) and silibinin (100 uM) treatment and cells without any treatment. Each sample has 2 biological replicates.

2015-12-31 | E-GEOD-64131 | biostudies-arrayexpress

Expression profile of Hepatocellular Carcinoma

Project description:Expression profiling of tumor and adjacent non-tumorous tissues of Hepatocellular Carcinoma (HCC) patients. Illumina HumanHT-12 V4.0 expression beadchip was used to obtain expression profiles across more than 31,000 annotated genes. Samples included 59 tumors and 59 adjacent non-tumorous samples.

2014-12-10 | GSE57957 | GEO

Expression profile of Hepatocellular Carcinoma

2014-12-10 | E-GEOD-57957 | biostudies-arrayexpress

Genome-wide analysis of gene expression in Non-small Cell Lung Cancer

Project description:Analysis of NSCLC development at gene expression level. Results shows that obvious activation of cell cycle pathway, and significant repression of cell-cell communication pathways. Illumina HumanHT-12 V4.0 expression beadchip

2012-09-16 | GSE29249 | GEO

Epigenetic Effects of Maternal Obesity on Wharton's Jelly (WJ) Mesenchymal Stromal Cells (MSCs): Implications For Cellular Therapy. (expression study)

Project description:7 WJ-MSC lines from non-obese BMI <25 kg/m2 were compared with 7 WJ-MSC lines obese BMI >30 kg/m2. No template was used as a negative control Triplicates for each line were analyses for human whole-genome gene expression profile using HumanHT-12 v4.0 Expression BeadChip (Illumina).

2017-11-21 | GSE107214 | GEO

Differential expression analysis of HaCaT and HaSKpw keratinocytes

Project description:Basal expression levels in untreated human keratinocytes were determined to compare the HaSKpw cell line with the HaCat cell line. Cells were grown without synchronisation until confluency was reached and three biological replciates per cell line were analysed. Expression profiles were generated using Illumina HumanHT-12 V4.0 expression beadchip and the HiScan system (Illumina)

2020-09-22 | GSE143521 | GEO

Genetic expressions alteration affect on lateral neck node metastasis of thyroid papillary microcarcinoma

Project description:We performed oligonucleotide microarray analysis to assess the genetic expression alteration wich affected on lateral neck node metastasis of thyroid papillary microcarcinoma(PTMC). We performed microarray analysis in three PTMCs without cervical lymph-node metastases (N0), and five PTMCs with lateral neck-node metastasis (N1b) at initial diagnosis, using an Illumina HumanHT-12 v4.0 Expression BeadChip.

2019-11-12 | GSE129562 | GEO

Transcriptomics response to miR-644 overexpression in three breast cancer cell lines

Project description:The goal of the study is to investigate the effect of microRNA-644 overexpression by chemical mimics on gene expression in breast cancer cell lines. To this purpose control and microRNA-644 mimics are used to transfect MDA-MB-231 cells, SK-BR-3 cells, and MCF-7 cells respectively. Transcriptomics profiling was performed with Illumina HumanHT-12 V4.0 BeadChip microarray.

2016-07-25 | GSE82058 | GEO

Assessing the developmental potential of human pluripotent stem cells using Pluritest

Project description:The International Stem Cell Initiative compared three common approaches for assessing pluripotent stem cells (PSC). The formation of teratomas in vivo, or embryoid bodies (EB) in vitro, provide direct tests of differentiation, whereas PluriTest predicts pluripotency through bioinformatic analysis of transcriptomes of undifferentiated cells. Here we studied the starting poulations of pluripotent stem cells using an Illumina HumanHT-12 V4.0 expression beadchip assays

2017-06-20 | GSE97884 | GEO

Combinatorial treatment of DNMT inhibitor and LSD1 inhibitor results in cell growth inhibition and reexpression of epigenetically silenced genes (gene expression)

Project description:A combinatorial treatment consisting of a DNMTi and a LSD1i shows synergistic effects in reactivating aberrantly silenced genes by enriching H3K4me2 and H3K4me. 24 Samples consisting of 3 cell lines hybridised to the Illumina HumanHT-12 V4.0 Beadchip.

2013-08-01 | E-GEOD-41676 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data