Transcriptomics,Genomics

Dataset Information

102

Expression data of three Frankia strains under nitrogen-replete and nitrogen-defiecent conditions


ABSTRACT: Purpose: To compare RNASeq data of Frankia strains (EAN1pec, EuIC and EUN1f) under nitrogen stress. Frankia cultures were grown for 2 days under nitrogen replete (+NH4) or nitrogen- deficient (N2) conditions. RNA-seq analysis provided insight into how the the bacteria responds to nitrogen stress. Overall design: mRNA profiles of bacteria from each Frankia strain (EAN1pec, EuI1c, EUN1f) grown under nitrogen-replete and niotrogen-defiencent conditions were generated by deep sequencing and mapped to their appropriate Frankia genome by CLC Gemonic Workstation. The transcriptome profiles of the nitrogen stress cells were compared to the control nitrogen replete condition.

INSTRUMENT(S): Illumina HiSeq 2000 (Frankia sp. EAN1pec)

SUBMITTER: Louis S Tisa  

PROVIDER: GSE64517 | GEO | 2018-04-18

REPOSITORIES: GEO

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