Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Human Calu-3 cell transcriptome response to human interferon α [miRNA]

ABSTRACT: The purpose is to obtain samples for mRNA and miRNA analysis with and without interferon α treatment; in parallel, to obtain cell pellets to forward to PNNL for use in top-down proteomics pilot experiments

ORGANISM(S): Homo sapiens

PROVIDER: GSE70220 | GEO | 2015/06/25

SECONDARY ACCESSION(S): PRJNA287910

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Human Calu-3 cell transcriptome response to human interferon α [mRNA]

2015-06-25 | GSE70217 | GEO

Human Calu-3 cell transcriptome response to human interferon α [mRNA]

Project description:The purpose is to obtain samples for mRNA and miRNA analysis with and without interferon α treatment; in parallel, to obtain cell pellets to forward to PNNL for use in top-down proteomics pilot experiments Human Calu-3 cells were seeded at 1 x 10^6 cells per well on 6 well plates 3 days before infection. Treatments were initiated by replacing culture medium (containing 10% FBS) with fresh medium containing 500 U/ml of human interferon α (PBL Biosciences). Mock-treated cells were given normal culture medium only. Mock and treated cells were incubated at 37°C until sample collection time points. Infected samples were collected in quadruplet; time-matched mocks were collected in quadruplet in parallel with infected samples. Time points: 6, 12, and 18 h post-infection

2015-06-25 | E-GEOD-70217 | biostudies-arrayexpress

Human Calu-3 cell transcriptome response to human interferon α [miRNA]

2015-06-25 | E-GEOD-70220 | biostudies-arrayexpress

Human Calu-3 cell transcriptome response to wild-type pandemic H1N1 (A/California/04/2009), natural isolate

2016-05-07 | GSE80698 | GEO

Human Calu-3 cell transcriptome response to wild-type pandemic H1N1 (A/California/04/2009), natural isolate [mRNA]

2016-05-26 | GSE80697 | GEO

Human Calu-3 cell transcriptome response to a wild type infectious clone of H7N9 Influenza virus and mutant H7N9 viruses

2015-05-20 | GSE69026 | GEO

Human Calu-3 cell micro RNA transcriptome response to a wild type infectious clone of H7N9 Influenza virus and mutant H7N9 viruses

2015-05-20 | GSE69027 | GEO

Immortalized human hepatocyte (IHH) microRNA response to interferon alpha treatment

Project description:The purpose of this experiment was to obtain samples for microRNA analysis in IHH cells infected with human interferon alpha.

2015-08-06 | GSE71733 | GEO

Immortalized human hepatocyte (IHH) mRNA response to interferon alpha treatment

Project description:The purpose of this experiment was to obtain samples for mRNA analysis in IHH cells infected with human interferon alpha.

2015-08-06 | GSE71732 | GEO

Human Calu-3 cell transcriptome response to a wild type infectious clone of H5N1 Influenza virus and mutant H5N1 viruses [miRNA]

Project description:The purpose is to obtain samples for mRNA, miRNA, proteomics, lipidomics, metabolomics, and histopathology analysis in human Calu-3 cells infected with wild-type A/Vietnam/1203/2004 (H5N1; 'VN1203'; derived by reverse genetics), PB2-K627E (627K is a mammalian-adapting mutation that increases polymerase replicatve activity; '627E' is typically found in avian species), and NS1-trunc124 (this 'NS1' protein has a 90 amino acid truncation at the C-terminus).

2016-02-20 | GSE76600 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data