Transcriptomics,Genomics

Dataset Information

32

Notch1 Signaling Regulates the Aggressiveness of Differentiated Thyroid Cancer and Inhibits SERPINE1 Expression


ABSTRACT: To identify novel down-stream effectors of Notch1 signaling, we have employed cDNA microarray expression profiling as a discovery platform. Human follicualr thyroid carcinoma cell line FTC236 was engineered with tet-on inducible system to establish a stable cell line. The stable cell line FTC236-Notch1 showed robust inducibility with doxycycline, which triggers the expression of Notch1 intracellular domain (NICD). The mRNA samples from FTC236-Notch1 cells with or without doxycline treamtment were analyzed in this assay. Top 50 gene sequences were identified as of the most significance which distinguished between doxycycline treated samples and control samples. Expression of SERPINE1, a down-regulated gene duing Notch1 activation from this signature, was quantified in the same RNA samples by real-time PCR. The protein level was further confirmed by Western blot that restoration of NICD inhibits the expression of SERPINE1. Overall design: NICD induced gene expression in human follicular thyroid cancer cell line was measured at 48 hours after exposure to doses of 0, and 1 ug/mL of doxycycline. Three independent experiments were performed at separate time.

INSTRUMENT(S): Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)

SUBMITTER: Brian P Johnson 

PROVIDER: GSE70627 | GEO | 2016-03-21

SECONDARY ACCESSION(S): PRJNA289234

REPOSITORIES: GEO

altmetric image

Publications

Notch1 Signaling Regulates the Aggressiveness of Differentiated Thyroid Cancer and Inhibits SERPINE1 Expression.

Yu Xiao-Min XM   Jaskula-Sztul Renata R   Georgen Maria R MR   Aburjania Zviadi Z   Somnay Yash R YR   Leverson Glen G   Sippel Rebecca S RS   Lloyd Ricardo V RV   Johnson Brian P BP   Chen Herbert H  

Clinical cancer research : an official journal of the American Association for Cancer Research 20160204 14


PURPOSE:Notch1, a transmembrane receptor, has been recently shown to aid in the determination of thyroid cell fate associated with tumorigenesis. This study aimed to investigate the clinical relevance of Notch1 and its role in the regulation of differentiated thyroid cancer (DTC) behavior. EXPERIMENTAL DESIGN:We examined Notch1 expression level and its relationship with clinicopathologic features and outcomes of DTC. Notch1 intracellular domain (NICD) was further characterized both in vitro and  ...[more]

Similar Datasets

2018-06-25 | PXD008747 | Pride
2015-03-26 | E-GEOD-62528 | ArrayExpress
2014-06-24 | E-GEOD-48260 | ArrayExpress
| GSE80215 | GEO
2014-06-04 | E-GEOD-44561 | ArrayExpress
2010-03-12 | GSE20285 | GEO
| GSE83759 | GEO
| GSE83755 | GEO
| GSE85791 | GEO
2010-03-23 | E-GEOD-20285 | ArrayExpress