Genomics

Dataset Information

43

Development of gene expression signatures for murine bladder: Control vs. UTI89


ABSTRACT: Antimicrobial peptides (AMPs) serve key proposed roles in defending the urinary tract against invading uropathogens, but individual AMPs bearing greatest responsibility for these functions remain largely unknown. We identified RegIIIγ as the most transcriptionally upregulated AMP in bladder transcriptomes following uropathogenic Escherichia coli (UPEC) infection. We confirmed induction of RegIIIγ mRNA during cystitis and pyelonephritis by quantitative RT-PCR. Immunoblotting demonstrates increased bladder and urinary RegIIIγ protein levels following UPEC infection. Immunostaining localizes RegIIIγ protein to urothelial cells of infected bladders and kidneys. Human patients with cystitis and pyelonephritis exhibit increased urine levels of the orthologous HIP/PAP protein. Recombinant RegIIIγ protein does not demonstrate bactericidal activity toward UPEC in vitro, but does kill Staphylococcus saprophyticus in a dose-dependent manner. RegIIIγ knockout and control urinary tracts contain comparable bacterial burden following experimental inoculation of UPEC as well as Gram-positive uropathogens. Thus, while RegIIIγ and HIP/PAP expression occurs in human and murine UTI, their specific functions in the urinary tract remain uncertain. Overall design: Control (Uninfected) Bladder vs. UTI89 Bladders (Infected 2, 6, and 48hrs). Biological replicates: 4 control replicates, 4 infected replicates per timepoint.

INSTRUMENT(S): Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)

SUBMITTER: Ashley R Jackson  

PROVIDER: GSE72007 | GEO | 2015-12-29

SECONDARY ACCESSION(S): PRJNA292711

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
GSE72007_RAW.tar Raw
filelist.txt Txt
Items per page:
1 - 2 of 2
altmetric image

Publications

Expression and Significance of the HIP/PAP and RegIIIγ Antimicrobial Peptides during Mammalian Urinary Tract Infection.

Spencer John David JD   Jackson Ashley R AR   Li Birong B   Ching Christina B CB   Vonau Martin M   Easterling Robert S RS   Schwaderer Andrew L AL   McHugh Kirk M KM   Becknell Brian B  

PloS one 20151210 12


Recent evidence indicates that antimicrobial peptides (AMPs) serve key roles in defending the urinary tract against invading uropathogens. To date, the individual contribution of AMPs to urinary tract host defense is not well defined. In this study, we identified Regenerating islet-derived 3 gamma (RegIIIγ) as the most transcriptionally up-regulated AMP in murine bladder transcriptomes following uropathogenic Escherichia coli (UPEC) infection. We confirmed induction of RegIIIγ mRNA during cystit  ...[more]

Similar Datasets

2015-01-01 | S-EPMC4675559 | BioStudies
2005-01-01 | S-EPMC546986 | BioStudies
2012-01-01 | S-EPMC3418756 | BioStudies
2019-01-01 | S-EPMC6854850 | BioStudies
2018-01-01 | S-EPMC6128224 | BioStudies
2011-01-01 | S-EPMC3187256 | BioStudies
2008-01-01 | S-EPMC2446707 | BioStudies
2017-01-01 | S-EPMC5666759 | BioStudies
2016-01-01 | S-EPMC5294914 | BioStudies
2016-01-01 | S-EPMC4884108 | BioStudies