Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genotyping of 22 Great Danes with Ichthyosis

ABSTRACT: Genotyping of 22 Great Danes on the Illumina high density BeadChip

ORGANISM(S): Canis lupus familiaris

PROVIDER: GSE73400 | GEO | 2015/11/03

SECONDARY ACCESSION(S): PRJNA296892

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

High concordance between SNPs identified by the porcine 60K BeadChip genotyping array (Illumina) and the assembly-versus-assembly method

2016-07-05 | GSE83910 | GEO

Identifying genetic etiology of CHD using SNP Array

Project description:High density genotyping of 7 affected and 3 unaffected family members was performed using the Illumina Omni2.5-8 v1.3 BeadChip SNP.

2021-12-31 | GSE191116 | GEO

Genotyping analysis employing Illumina Infinium ImmunoArray-24 v2.0 BeadChip

Project description:Genotyping analysis employing Illumina Infinium ImmunoArray-24 v2.0 BeadChip

| PRJNA414780 | ENA

Genotyping of paired samples of normal colon and colon adenocarcinoma to estimate copy-number alterations

Project description:22 pairs of normal colon\colon adenocarcinoma samples were genotyped using Illumina HumanOmni1-Quad BeadChip to estimate copy number alterations

2013-02-01 | GSE43933 | GEO

Genotyping of Infinium OmniZhongHua BeadChip from Illumina for haplotype construction

Project description:Genotyping of Infinium OmniZhongHua BeadChip from Illumina for haplotype construction

| PRJNA625464 | ENA

Genotyping in Neuroblastoma Primary tumors

Project description:We performed genotyping of Neuroblastoma Primary tumors using Illumina HumanHap 550 - v1,v3,v3duo and 610 Quad genotyping beadchips.

2011-09-15 | GSE19385 | GEO

High concordance between SNPs identified by the porcine 60K BeadChip genotyping array (Illumina) and the assembly-versus-assembly method

Project description:Porcine 60K BeadChip genotyping arrays (Illumina) are increasingly being applied in pig genomics to validate SNPs identified by re-sequencing or assembly-versus-assembly method. Here we report that more than 98% SNPs identified from the porcine 60K BeadChip genotyping array (Illumina) were consistent with the SNPs identified from the assembly-based method. This result demonstrates that whole-genome de novo assembly is a reliable approach to deriving accurate maps of SNPs. To compare SNPs identified by genotyping arrays and de novo assembly method, we genotyped 10 pig breeds by porcine 60K BeadChip genotyping array (Illumina), including 1 berkshire pig, 1 hampshire pig, 1 landrace pig, 1 large white pig,1 piÃ©train pig, 1 bamei pig,1 jinhua pig, 1 meishan pig, 1 rongchang pig and 1 Tibetan wild boar.

2016-07-05 | E-GEOD-83910 | biostudies-arrayexpress

Genotyping of paired samples of normal colon and colon adenocarcinoma to estimate copy-number alterations

Project description:22 pairs of normal colon\colon adenocarcinoma samples were genotyped using Illumina HumanOmni1-Quad BeadChip to estimate copy number alterations Genomic DNA of 22 colon adenocarcinoma samples and 22 corresponding normal colon samples were genotyped using Illumina HumanOmni1-Quad BeadChip to estimate copy number alterations.

2013-02-01 | E-GEOD-43933 | biostudies-arrayexpress

Canis lupus familiaris

Project description:Genotyping of 22 Great Danes with Ichthyosis

| PRJNA296892 | ENA

Affymetrix SNP array data for wild Dutch great tits (Parus major)

Project description:The great tit is a widely studied passerine bird species in ecology that, in the past decades, has provided important insights into speciation, phenology, behavior and microevolution. After completion of the great tit genome sequence, a customized high density 650k SNP array was developed enabling more detailed genomic studies in this species.

2018-02-19 | GSE105131 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data