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Genome-wide maps of Cic binding sites in intestinal stem cells (ISCs) & Entroblasts (EBs) and transcriptome profiling of Cic depleted progenitor cells (ISCs & Ebs).

ABSTRACT: Purpose: Cic is a transcription factor regulating intestinal stem cell (ISC) proliferation as downstream effector of EGFR signaling pathway. ISC-specific mRNA expression profiling and DNA binding mapping using DamID were performed to identify potential target of Cic. Methods: Total RNA was isolated from GFP+ FACS sorted cells and sent for sequencing after amplification. Conclusions: We identified potential target genes of Cic, which is differetially expressed in Cic depleted ISCs and also associated Cic binding peaks.

ORGANISM(S): Drosophila melanogaster

PROVIDER: GSE74188 | GEO | 2015/10/21

SECONDARY ACCESSION(S): PRJNA299299

REPOSITORIES: GEO

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The RNA-Seq transcriptome of human prostate cancer cell line depleted of CIC

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