Genomics,Multiomics

Dataset Information

33

Pre-anthesis anthers of S. pennellii introgression lines


ABSTRACT: Expression in pollen of four pennellii NILs were contrasted to the recurrent parent (S. lycopersicum) Overall design: Each of 4 hybrids is compared to the control

OTHER RELATED OMICS DATASETS IN: PRJNA309825PRJNA309828

INSTRUMENT(S): [Tomato] Affymetrix Tomato Genome Array

SUBMITTER: Rafael F Guerrero 

PROVIDER: GSE77232 | GEO | 2016-01-27

SECONDARY ACCESSION(S): PRJNA309825

REPOSITORIES: GEO

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Publications

Genome-wide patterns of regulatory divergence revealed by introgression lines.

Guerrero Rafael F RF   Posto Amanda L AL   Moyle Leonie C LC   Hahn Matthew W MW  

Evolution; international journal of organic evolution 20160224 3


Understanding the genetic basis for changes in transcriptional regulation is an important aspect of understanding phenotypic evolution. Using interspecific introgression lines, we infer the mechanisms of divergence in genome-wide patterns of gene expression between the nightshades Solanum pennellii and S. lycopersicum (domesticated tomato). We find that cis- and trans-regulatory changes have had qualitatively similar contributions to divergence in this clade, unlike results from other systems. A  ...[more]

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