Pasha: a versatile R package for piling chromatin HTS data

ABSTRACT: We describe an R package designed for processing aligned reads from chromatin-oriented high-throughput sequencing experiments. Pasha (preprocessing of aligned sequences from HTS analyses) allows easy manipulation of aligned reads from short-read sequencing technologies (ChIP-Seq, FAIRE-seq, Mnase-Seq...) and offers innovative approaches to process and extract relevant information.

ORGANISM(S): Homo sapiens

PROVIDER: GSE79385 | GEO | 2016/03/18

SECONDARY ACCESSION(S): PRJNA315673

REPOSITORIES: GEO