Transcriptomics,Genomics

Dataset Information

171

Transcriptome analysis of 'Candidatus Liberibacter solanacearum' in its psyllid vector, Bactericera cockerelli [sexed insects]


ABSTRACT: We sequenced mRNA from the bacterial pathogen 'Candidatus Liberibacter solanacearum" during its association with the psyllid vector Bactericera cockerelli. Overall design: Total RNA was purified from psyllids, insect and bacterial rRNAs were depleted. PolyA RNA was purified using Dynabeads. PolyA purified RNA and depleted RNA were sequenced.

INSTRUMENT(S): Illumina HiSeq 2500 (Candidatus Liberibacter solanacearum)

SUBMITTER: Cecilia Tamborindeguy  

PROVIDER: GSE81209 | GEO | 2017-02-09

SECONDARY ACCESSION(S): PRJNA320888

REPOSITORIES: GEO

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Publications

Interactions "Candidatus Liberibacter solanacearum"-Bactericera cockerelli: Haplotype Effect on Vector Fitness and Gene Expression Analyses.

Yao Jianxiu J   Saenkham Panatda P   Levy Julien J   Ibanez Freddy F   Noroy Christophe C   Mendoza Azucena A   Huot Ordom O   Meyer Damien F DF   Tamborindeguy Cecilia C  

Frontiers in Cellular and Infection Microbiology 20160609


"Candidatus Liberibacter solanacearum" (Lso) has emerged as a serious threat world-wide. Five Lso haplotypes have been identified so far. Haplotypes A and B are present in the Americas and/or New Zealand, where they are vectored to solanaceous plants by the potato psyllid, Bactericera cockerelli (Šulc) (Hemiptera: Triozidae). The fastidious nature of these pathogens has hindered the study of the interactions with their eukaryotic hosts (vector and plant). To understand the strategies used by the  ...[more]

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