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MRNA expression profile in murine bone marrow-derived macrophages that were isolated from calpain-6 wild-type and deficient mice

ABSTRACT: Transcriptional profiling of calpain-6-deficient murine bone marrow-derived macrophages comparing with calpain-6 wild-type macrophages. Total RNA was extracted from the pooled cells.

ORGANISM(S): Mus musculus

PROVIDER: GSE83815 | GEO | 2016/06/29

SECONDARY ACCESSION(S): PRJNA327087

REPOSITORIES: GEO

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mRNA expression profile in murine bone marrow-derived macrophages that were isolated from calpain-6 wild-type and deficient mice

Project description:Transcriptional profiling of calpain-6-deficient murine bone marrow-derived macrophages comparing with calpain-6 wild-type macrophages. Total RNA was extracted from the pooled cells. Two-condition experiment, wild-type macrophages vs. calpain-6-deficiennt macrophages. The cells were derived from four mice, and were pooled for analysis.

2016-06-29 | E-GEOD-83815 | biostudies-arrayexpress

RNA-seq of SCD2-deficient murine bone marrow-derived macrophages

Project description:We evaluated the effect of Scd2 ablation on the transcriptome of bone marrow-derived macrophages prepared from mice.

2023-05-19 | GSE226259 | GEO

Mitochondrial dysfunction and consequences in calpain-3-deficient muscle

Project description:Microarray profiling to determine muscle cell-specific consequences of calpain-3 deficiency

2022-03-28 | GSE199621 | GEO

Mitochondrial dysfunction and consequences in calpain-3-deficient muscle myoblasts

Project description:Microarray profiling to determine muscle cell-specific consequences of calpain-3 deficiency

2022-03-28 | GSE199620 | GEO

CEBPB Immunoprecipitation from Bone Marrow Derived Macrophages

Project description:Data from the immunoprecipitation of CEBPB from bone marrow derived macrophages.

2020-03-17 | MSV000085112 | MassIVE

Murine bone marrow derived macrophages: wildtype Vs. CDK5R1 knockout

Project description:Transcriptional profiling of mouse bone marrow derived macrophages comparing wildtype with CDK5R1 knockout. CDK5R1 is an activating parter for CDK5 and synthesized upon TLRs stimaultion. Activated CDK5 has various target substrates, and functions as a key singnaling regulator in macrophages. Two condition experiments: basal state and LPS-stimulated macrophages for 6 hours. Two biological replicates.

2014-11-20 | E-GEOD-63443 | biostudies-arrayexpress

RNASeq analysis of murine bone marrow derived macrophages (BMDMs)

Project description:Macrophages can adapt and change various activation states. Pro-inflammatory macrophages are induced by stimulation with LPS or IFNy whereas repair macrophages are induced by stimulation with IL4/IL13. However, due to their plasticity macrophages might adapt several activation states including inflammatory- and repair-like activation states as well as intermediate activation states which are associated with distinct gene expression patterns.

2023-04-06 | GSE182024 | GEO

Conditioned medium from bone marrow derived macrophages

Project description:Conditioned medium (CM) from bone marrow derived macrophages untreated or treated with LPS was collected and filtered through a 0.22-μm filter. The filtered CM was sequentially fractionated with 50-kDa and 100-kDa Amicon filters. The 50–100 kDa fraction of CM was analyzed by mass spectrometry.

2022-11-01 | PXD034550 | JPOST Repository

Murine bone marrow derived macrophages: wildtype Vs. CDK5R1 knockout

2014-11-20 | GSE63443 | GEO

Gene expression analysis of IL-4 primed bone marrow macrophages isolated from Irf4-deficient or heterozygous mice

Project description:To analyse the Irf4-dependent transcriptional changes of mouse bone marrow-derived macrophages (BMM) in response to IL-4, we have employed whole genome microarray expression profiling. For this purpose, bone marrow cells were isolated from 8 to 12 weeks old Irf4-deficient or heterozygous mice and cultured in the presence of the macrophage colony-stimulating factor (M-CSF) . After seven days of culture, IL-4 was added for 4 and 18 hours. Keywords: Mouse strain comparision; Gene expression profiling IL-4 induced gene expression was investigated in mouse bone marrow-derived macrophages (BMM) of Irf4-deficient or heterozygous mice. BMM were incubated with mouse recombinant IL-4 for 4 or 18 hours or without for 18 hours. Three independent experiments were performed at each time point (mock, 4 and 18 hours) using littermates for each experiment.

2010-10-01 | E-GEOD-21853 | biostudies-arrayexpress

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