Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ATAC-seq of AML1-ETO9 leukemias

ABSTRACT: The goals of this study are to identify ASXL2 binding sites in SKNO1 cells

ORGANISM(S): Mus musculus

PROVIDER: GSE84364 | GEO | 2017/06/26

SECONDARY ACCESSION(S): PRJNA329033

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

ChIP-seq of ASXL2 in SKNO1 cells

Project description:The goals of this study are to identify ASXL2 binding sites in SKNO1 cells

2017-06-26 | GSE84363 | GEO

ChIP-seq of H3K27me3 in SKNO1 cells after knockdown of ASXL2

Project description:The goals of this study are to identify the changes of H3K27me3 in SKNO1 cells after knockdown of ASXL2

2017-06-26 | GSE84362 | GEO

ChIP-seq of H3K27Ac in SKNO1 cells after knockdown of ASXL2

Project description:The goals of this study are to identify the changes of H3K27Ac in SKNO1 cells after knockdown of ASXL2

2017-06-26 | GSE93164 | GEO

ChIP-seq of H3K4me1 and H3K4me3 in SKNO1 cells after knockdown of ASXL2

Project description:The goals of this study are to identify the changes of H3K4me1 and H3K4me3 in SKNO1 cells after knockdown of ASXL2

2017-06-26 | GSE84361 | GEO

ChIP-seq of H3K27me3 in Asxl1 or Asxl2 KO mice

Project description:The goals of this study are to identify H3K27me3 changes in Asxl1 or Asxl2 KO mice

2017-06-26 | GSE93165 | GEO

RNA-seq of Asxl2 KO LSK cells

Project description:The goals of this study are to compare transcriptome profiling (RNA-seq) of Asxl2 KO LSK cells to that of Asxl2 wild-type cells. We found substantial number of genes are differentially expressed in Asxl2 KO cells.

2017-06-26 | GSE84357 | GEO

Homo sapiens

Project description:ChIP-seq of ASXL2 in SKNO1 cells

| PRJNA329034 | ENA

RNA-seq of ASXL2 shRNA KD in SKNO-1 cells

Project description:The goals of this study are to compare transcriptome profiling (RNA-seq) of Asxl2 knockdowned SKNO-1 cells to control SKNO-1 cells. We found substantial number of genes are differentially expressed in Asxl2 knockdowned cells.

2017-06-26 | GSE84358 | GEO

RNA-seq of primary patient AML samples

Project description:The goals of this study are to compare transcriptome profiling (RNA-seq) of patients BM with or without ASXL2 mutations.

2017-06-26 | GSE84359 | GEO

AML1/ETO, AML1, and HEB binding patterns on chromosme 19

Project description:Approximately 20% of Acute Myelogenous Leukemia (AML) cases carry the t(8;21) translocation, which involves the AML1 and ETO genes, and express the resulting AML1/ETO fusion protein that functions as a transcriptional repressor by recruiting NCoR/SMRT/HDAC complexes to DNA. We used ChIP-chip to identify the determinants of AML1/ETO binding on a contiguous DNA region (chromosome 19). AML1/ETO binding regions are characterized by a specific sequence signature that includes the presence of the consensus binding sites for the AML1 and HEB transcription factors. We therefore assessed the binding patterns of AML1 and HEB on chromosome 19. A specific chromatin modification (tri-methylation of lysine 4 on histone 3 = 3MetK4) was also studied in U937 cells expressing AML1/ETO in order to correlate the identified binding profiles with active transcription sites. Keywords: ChIP-chip

2008-11-28 | GSE10578 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data