Genomics

Dataset Information

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Gene expression profiles of 29 European maize inbred lines, factorial 2012LP1


ABSTRACT: We applied a custom 2k micro-array with 2232 oligonucleotide sequences (50-70 nt) to a factorial with 29 parental inbred lines (16 Dent,13 Flint) of European maize (Zea mays L.). The selection of oligonucleotides was based on 47k-array expression data from a 14x7 factorial with 98 hybrids (GSE17754). The main fraction of oligonucleotides (1639) represents genes that showed differential expression between the parental genotypes in the 14x7 factorial and consistent association with HP for GY in cross validation runs to estimate prediction accuracies for this trait. In addition the array contains partial overlapping fractions of genes that correlated with HP/GY (378), HP/GDMC (200), or MPH/GY (345) and 205 representatives of the 6 most overrepresented biological processes among genes correlated with HP/GY in the 14x7 factorial.

ORGANISM(S): Zea mays

PROVIDER: GSE85285 | GEO | 2016/08/18

SECONDARY ACCESSION(S): PRJNA339281

REPOSITORIES: GEO

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