Transcriptomics,Genomics

Dataset Information

21

Immuno-related transcripts in biliary tract cancers


ABSTRACT: Tumour and adjacent components from human resected biliary tract cancers were characterised for the expression of immunorelated transcripts Overall design: 22 cases were microdissected to achieve tumour and adjacent tissue. RNA was obtained for 22 tumour (T) with matched adjacent tissue (N).

INSTRUMENT(S): nCounter PanCancer Immune Profiling Panel

SUBMITTER: Chiara Braconi  

PROVIDER: GSE90698 | GEO | 2018-02-14

REPOSITORIES: GEO

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Publications


Although biliary tract cancers (BTCs) are known to have an inflammatory component, a detailed characterisation of immune-related transcripts has never been performed. In these studies, nCounter PanCancer Immune Profiling Panel was used to assess the expression of 770 immune-related transcripts in the tumour tissues (TTs) and matched adjacent tissues (ATs) of resected BTCs. Cox regression analysis and Kaplan-Meier methods were used to correlate findings with relapse-free survival (RFS). The first  ...[more]

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