Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression data from brains of BCAS1 knockout or wildtype mice

ABSTRACT: We used microarrays to compare the expression profiles between brains of BCAS1 knockout and wild type mice

ORGANISM(S): Mus musculus

PROVIDER: GSE91394 | GEO | 2017/03/01

SECONDARY ACCESSION(S): PRJNA356894

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Analysis of NSL knockout brains

Project description:Analysis of NSL knockout brains

| PRJNA577934 | ENA

Analysis of DJ-1 Knockout Mouse Brains

Project description:We analyzed metabolites in the brains of wild type mice and DJ-1 knockout mice. The DJ-1 knockout mouse is a model of an inherited form of Parkinson's disease.

2015-09-17 | ST000260 | MetabolomicsWorkbench

Gene expression profile changes in brains of VSV-infected wild-type and Ifit2 knockout mice at 6 days after infection

Project description:Vesicular stomatitis virus replicates with marked effciency in Ifit2 knockout mouse brains late after infection (6 days after intranasal inoculation), compared to wt brains. Changes in gene expression, especially of interferon-stimulated genes, between late in infection (at 6 d p.i.) compared to early during infection (2 d p.i.) were examined in comparison to wild-type. Total RNA extracted from mouse brains of wt or Ifit2 knockout mice at 6 days after infection, compared to RNA from 2 days after infection.

2012-11-14 | E-GEOD-33678 | biostudies-arrayexpress

iTRAQ Analysis of DJ-1 Knockout Rodent Brains

Project description:Mutations in the DJ-1 (Park7) gene cause autosomal recessive Parkinson's disease in humans, but the function of the DJ-1 protein is poorly characterized. In an effort to understand more about the biology of DJ-1, we performed iTRAQ analyses on subcellular fractions enriched from DJ-1 knockout rat and mouse brains. We generated iTRAQ datasets for mitochondria and cytosol enriched fractions from 6-month-old rat brains, and the cytosol enriched fraction from 14-15-month old mouse brains. Our subsequent analyses of these datasets led to our discovery that the Hexokinase 1 protein was increased in the cytosol components of both DJ-1 knockout species.

2017-10-04 | PXD005215 | Pride

Expression data from SIRT6 knockout, young WT and old WT mice brains

Project description:Expression data from SIRT6 knockout, young WT and old WT mice brains

| PRJNA738953 | ENA

Gene expression profile changes in brains of VSV-infected wild-type and Ifit2 knockout mice at 6 days after infection

2012-11-14 | GSE33678 | GEO

Expression data from mice mammary glands from Elf5 knockout (KO) and wildtype controls

Project description:We developed conditional knockout mice where the transcription factor Elf5 (also called ESE-2) is deleted in the mammary glands. Loss of Elf5 results in block in alveologenesis and epithelial differentiation defects. Mammary gland samples from Elf5 knockout and wild type animals were analyzed for global transcriptome changes. We used microarrays to performing transcriptional profiling of Elf5KO and control mammary glands at Lac1 (Lactation day 1)

2012-09-01 | E-GEOD-32103 | biostudies-arrayexpress

Transcriptomic analysis of conditional THAP1 knockout mice brains using microarray

Project description:Loss of function mutations in the transcription factor THAP1 cause DYT6 dystonia, a childhood-onset motor disorder. DYT6 subjects display abnormalities in the white matter regions of the brain. Here, we generated conditional THAP1 knockout mice and analyzed the gene expression profiles from motor regions of mice brains to identify a role for THAP1 in the control of myelination

2017-07-10 | GSE97372 | GEO

Expression data from retinas of wildtype and Nhlh2 knockout mice

Project description:Nhlh2 is a neuronal helix-loop-helix transcription factor. The goal of this study was to determine the pattern of gene expression in wildtype mouse retina and to compare it to that in the retinas of mice in which the nhlh2 gene had been knocked out. RNA was extracted from three pairs of littermates, each comprising one wildtype and one knockout sample. The littermate samples are: retina_wt_rep1 & retina_nhlh2_rep1; retina_wt_rep2 and retina_nhlh2_rep2; retina_wt_rep3 & retina_nhlh2_rep3.

2010-03-03 | E-GEOD-16756 | biostudies-arrayexpress

Expression data from mice mammary glands from Elf5 knockout (KO) and wildtype controls

2012-09-01 | GSE32103 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data