Transcriptomics,Genomics

Dataset Information

35

What is the transcriptomic contrast between a TDNA-mutant and its respective wild-type from young Arabidopsis rosette?


ABSTRACT: ra15-07_burxcol_465 - burxcol-465 - What is the transcriptomic contrast between a TDNA-mutant and its respective wild-type from young rosette grown in precisely-controlled conditions on our phenotyping robot (Phenoscope)? - The candidate gene (AT1G36310) was identified through QTL mapping and cloning for rosette leaf growth trait in a Bur x Col RIL set. It corresponds to a medium effect on growth and a major effect on other traits (leaf colour and pigments). We are now exploiting an independent TDNA-insertion line (SALK_135308) in the Col-0 background) to study its effect in a simple genetic context. This is a simple comparison between homozygous T-DNA (2 lines) and their respective WT (2 lines). Overall design: 2 dye-swap - gene knock out

INSTRUMENT(S): Agilent-047069 CATMAv7 [Probe Name Version]

SUBMITTER: Stéphanie Pateyron  

PROVIDER: GSE93513 | GEO | 2017-02-01

SECONDARY ACCESSION(S): PRJNA360972

REPOSITORIES: GEO

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