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Transcriptome analysis on wild type and ddx39a mutant zebrafish embryos by Next Generation Sequencing

ABSTRACT: DEAD box RNA helicase DDX39A has been shown to regulate RNA metabolism; however its role in vertebrate development has not previously been examined. To determine the impact of loss of ddx39a on transcriptome during vertebrate early development, we pursued transcriptome analysis (RNA-Seq) on wild type and ddx39a mutant zebrafish embryos at 24 hour-post-fertilization. And by using RIP-seq to identify targeted RNA which were DDX39A binded.

ORGANISM(S): Danio rerio

PROVIDER: GSE97067 | GEO | 2017/03/28

SECONDARY ACCESSION(S): PRJNA380609

REPOSITORIES: GEO

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Unwinding the roles of DEAD-box RNA helicases DDX39A and DDX39B in alternative RNA splicing

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