Transcriptomics

Dataset Information

47

Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation


ABSTRACT: Gene expression analysis of 7d-old Arabidopsis seedlings exposed to short term (2 h) hypoxia, long term (9 h) hypoxia, and 1 h reoxygenation after long term (9 h) hypoxia to evaluate the regulation of gene expression at the level of translation. Keywords: Time Course, hypoxia recovery, polysomal mRNA, IP RNA, polysomes, hypoxia stress, reoxygenation, translational control. Overall design: 30 samples, 5 conditions (2 hr hypoxia stress, 2hr non-stress, 9 hr hypoxia stress , 9 hr non-stress, 9 hr hypoxia with 1 hr recovery), 2 RNA pools (Total mRNA and polysomal mRNA), 3 replicates

REANALYSED by: GSE118579GSE119128

INSTRUMENT(S): [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Charles Jang   

PROVIDER: GSE9719 | GEO | 2008-07-22

SECONDARY ACCESSION(S): PRJNA103627

REPOSITORIES: GEO

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