DRUID: A pipeline for reproducible transcriptome-wide measurements of mRNA stability

ABSTRACT: We present DRUID (for Determination of Rates Using Intron Dynamics), a computational pipeline, for determining mRNA stability transcriptome-wide uses metabolic labeling and approach-to-equilibrium kinetics. Our pipeline uses endogenous introns to normalize time course data and yields more reproducible half-lives than other methods, even with datasets that were otherwise unusable. DRUID can handle datasets from a variety of organisms, spanning yeast to humans.

OTHER RELATED OMICS DATASETS IN: PRJNA388686

ORGANISM(S): Mus musculus Saccharomyces cerevisiae Homo sapiens Caenorhabditis elegans Drosophila melanogaster

PROVIDER: GSE99517 | GEO | 2018/01/05

SECONDARY ACCESSION(S): PRJNA388686

REPOSITORIES: GEO