Metabolomics

Dataset Information

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GNPS - Metabolic output from Wheatgrass Mixed Microbial Culture


ABSTRACT: This dataset contains .mzml and .d files from a time-course study to assess the metabolic stability of control and wheatgrass-associated mixed microbial cultures (MMCs). The metadata file is also included. Instrument settings: Agilent Eclipse C18 column, 1.8 um, 2.1 x 50 mm. Method: Solvent A, water with 0.1% formic acid, solvent B, acetonitrile with 0.1% formic acid; gradient of 2-98% acetonitrile in 18 min; flow rate of 0.4 mL/min; column temperature at 30C. MS/MS settings: MS scan range 100-1200 m/z, where two most abundant precursors selected for MS/MS (range 50-800); collision energy of 50 eV (positive mode).

INSTRUMENT(S): Agilent iFunnel 6550 Q-ToF LC/MS System

ORGANISM(S): Agropyron Cristatum (ncbitaxon:4593) Bacterial Community Associated With Wheatgrass

SUBMITTER: Akira Kawamura  

PROVIDER: MSV000086394 | GNPS | Sat Oct 31 15:32:00 GMT 2020

REPOSITORIES: GNPS

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Publications

Uncovering potential interspecies signaling factors in plant-derived mixed microbial culture.

Domzalski Alison A   Perez Susan D SD   Yoo Barney B   Velasquez Alexandria A   Vigo Valeria V   Pasolli Hilda Amalia HA   Oldham Athenia L AL   Henderson Douglas P DP   Kawamura Akira A  

Bioorganic & medicinal chemistry 20210604


Microbes use signaling factors for intraspecies and interspecies communications. While many intraspecies signaling factors have been found and characterized, discovery of factors for interspecies communication is lagging behind. To facilitate the discovery of such factors, we explored the potential of a mixed microbial culture (MMC) derived from wheatgrass, in which heterogeneity of this microbial community might elicit signaling factors for interspecies communication. The stability of Wheatgras  ...[more]

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