Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS_Molecular Networking of coculture Aspergillus spp. NCA257, NCA276 and Cladosporium sp. NCA273

ABSTRACT: Untargeted metabolomics (LC/MS) of fungal extracts (chloroform:methanol) isolated from Cenote Tza Itza in Yucatan, Mexico.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Aspergillus (ncbitaxon:5052) Cladosporium (ncbitaxon:5498)

SUBMITTER: Mario Figueroa

PROVIDER: MSV000088690 | GNPS | Mon Jan 17 10:19:00 GMT 2022

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Similar Datasets

Fungal extracts from Cenote Tza Itza

Project description:Untargeted metabolomics (LC/MS) of fungal extracts (chloroform:methanol) isolated from Cenote Tza Itza in Yucatan, Mexico.

2022-01-17 | MSV000088691 | MassIVE

GNPS Fungal extracts from Cenote Tza Itza

Project description:Untargeted metabolomics (LC/MS) of fungal extracts (chloroform:methanol) isolated from Cenote Tza Itza in Yucatan, Mexico.

2022-01-17 | MSV000088691 | GNPS

Talaromyces sp. IQ-313 grown in coculture with Aspergillus sp. IQ-043

Project description:A coculture experiment was performed between different fungal species.

2023-03-27 | MSV000091553 | MassIVE

Acapulco Bay Aspergillus sp ACA9 for publication

Project description:This data correspond to crude extracts and pure componds isolated from an Aspergillus fungi from Acapulco Bay, Mexico. We have to know te relevance on different culture conditions of this fungi. -----------------------------------------------------------------------

2021-02-11 | MSV000086851 | MassIVE

Evaluation of Two Simultaneous Metabolomic and Proteomic Extraction Protocols Assessed by Ultra-High-Performance Liq-uid Chromatography Tandem Mass Spectrometry

Project description:Untargeted multi-omics analysis of plasma is an emerging tool for the identification of novel biomarkers for evaluating disease prognosis and for a better understanding of molecular mechanisms underlying human disease. The successful application of metabolomic and pro-teomic approaches relies on reproducibly quantifying a wide range of metabolites and proteins. Herein, we report the results of untargeted metabolomic and proteomic analyses from blood plasma samples following analyte extraction by two frequently used solvent systems: chloro-form/methanol and methanol-only. Whole blood samples were collected from participants (n=6) at University Hospital Sharjah (UHS) hospital, then plasma was separated and extracted by two methods i. methanol precipitation and, ii. 4:3 methanol:chloroform extraction. The coverage and reproducibility of the two methods were assessed by ultra-high-performance liquid chromatography-electrospray ionization quadrupole time-of-flight mass spectrometry (UHPLC-ESI-QTOF-MS). The study revealed that metabolite extraction by methanol-only showed greater reproducibility for both metabolomic and proteomic quantifications than did methanol/chloroform, while yielding similar peptide coverage. However, coverage of extracted metabolites was higher with the methanol/chloroform precipitation.

2023-01-17 | PXD038750 | Pride

Penicillium sp. CIGOM10_CONDITIONS_20210511

Project description:As part of our investigations on the chemical diversity of organisms from unexplored marine habitats of Mexico, a series of 29 fungal strains isolated from deep-sea sediments (more than 600 m deep) from the Gulf of Mexico were investigated. The antimicrobial potential of their organic extracts from solid cultures grown under the OSMAC approach was assessed against a panel of ESKAPE bacteria and the yeast C. albicans. Chemical studies on the active scaled-up cultures and some small-scale cultures led to the isolation of benzochromenones from Alternaria sp. CIGOM4, benzodiazepines from P. echinulatum CONTIG4, a cytochalsin from Biatriospora sp. CIGOM2, and an imidazopyridoindole from Penicillium sp. CIGOM10. Molecular network analysis by GNPS combined with manual dereplication showed the enormous potential of these fungi to produce bioactive compounds.

2021-10-11 | MSV000088213 | MassIVE

Biatriospora sp. CIGOM2_CONDITIONS_20210511

2021-10-11 | MSV000088212 | MassIVE

Comparative transcriptome analysis of a novel obligate Methylomonas sp. DH-1 reveals key differences in the transcriptional responses in C1 and secondary metabolite pathways during growth on methane and methanol

Project description:We integrated genomic and transcriptomic analysis of a newly isolated obligate Methylomonas sp. DH-1 grown on methane and methanol. Comparative transcriptomic analysis between methane and methanol as a sole carbon source revealed different transcriptional responses of Methylomonas sp. DH-1, especially in C1 assimilation, the secondary metabolites pathways and the oxidative stress related genes

2019-02-26 | GSE101494 | GEO

Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative <i>Aspergillus</i> sp. MEXU 27854.

Project description: Not available

| S-EPMC8433890 | biostudies-literature

GNPS Acapulco Bay Aspergillus sp ACA9 for publication

2021-02-11 | MSV000086851 | GNPS