Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS - 2024_GNPS_Workshop_plant_subset

ABSTRACT: Example files for a GNPS Molecular Networking Workshop held online. Data are composed of four Malpighiaceae plant samples (a subset of MSV000085119). Data were acquired in a Maxis Impact Q-TOF mass spectrometer (Bruker Daltonics) equipped with an ESI source (positive ionization mode).

INSTRUMENT(S): maXis

ORGANISM(S): Amorimia Andersonii (ncbitaxon:1816314) Niedenzuella Multiglandulosa (ncbitaxon:1816324) Stigmaphyllon Paralias (ncbitaxon:151877) Stigmaphyllon Blanchetii (ncbitaxon:1804190)

SUBMITTER: Vanderlan da Silva Bolzani Pieter C. Dorrestein

PROVIDER: MSV000094217 | GNPS | Fri Mar 01 15:27:00 GMT 2024

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

2023_GNPS_MolecularNetworking_Workshop_CMMC

Project description:Example files for a GNPS Molecular Networking Workshop held online as part of the Collaborative Microbial Metabolite Center. Data are composed of two fecal samples from the American Gut Project (MSV000080673) and three samples (and their media blanks) from cultured bacteria with media containing bile acids (MSV000084475). Data were acquired in a Maxis Impact Q-TOF mass spectrometer (Bruker Daltonics) equipped with ESI source (positive ionization mode).

2023-05-10 | MSV000091912 | GNPS

Project description:Example project for ENA submission workshop

| PRJEB55685 | ENA

Transcription profiling of human cancer cell lines resistant to methotrexate

Project description:This SuperSeries is composed of the following subset Series:; GSE11440: Role of Caveolin 1, E-Cadherin, Enolase 2 and PKCa on resistance to methotrexate in human HT29 colon cancer cells; GSE16066: Networking of differentially expressed genes in CaCo2 human colon cancer cells resistant to methotrexate; GSE16070: Networking of differentially expressed genes in human MCF7 breast cancer cells resistant to methotrexate; GSE16080: Networking of differentially expressed genes in human MDA-MB-468 breast cancer cells resistant to methotrexate; GSE16082: Networking of differentially expressed genes in human MIA PaCa2 pancreatic cancer cells resistant to methotrexate; GSE16085: Networking of differentially expressed genes in human K562 erythtoblastic leukemia cells resistant to methotrexate; GSE16089: Networking of differentially expressed genes in human Saos-2 osteosarcoma cells resistant to methotrexate Experiment Overall Design: Refer to individual Series

2009-09-11 | E-GEOD-16648 | biostudies-arrayexpress

Dataset Workshop on Advanced Mass Spectometry 2025

Project description:LC-MS/MS data of crude extracts produced by isolated bacteria recovered from Brazilian Rocas Atoll. Subset of MSV000083601 for use as an example dataset on the Workshop on Advanced Mass Spectometry 2025.

2025-12-09 | MSV000100158 | MassIVE

GNPS Feature-Based Molecular Networking Workshop - American Gut subset with metadata for plant consumption

Project description:GNPS Feature-Based Molecular Networking Workshop - American Gut subset with metadata for plant consumption See manuscript here: https://msystems.asm.org/content/3/3/e00031-18

2018-08-02 | MSV000082678 | GNPS

Cancer: Thriving and Surviving Online Workshop and Study for Cancer Survivors

Project description:Cancer: Surviving and Thriving is a 6-week workshop for cancer survivors. The overall goal of the study is to determine whether an online cancer survivor education and support workshop can have lasting beneficial effects in helping survivors improve their self-management of health skills and quality of life.

| 2076916 | ecrin-mdr-crc

test

Project description:workshop

| PRJEB7278 | ENA

Untargeted metabolomics workshop report: quality control considerations from sample preparation to data analysis

Project description:The Metabolomics workshop on experimental and data analysis training for untargeted metabolomics was hosted by the Proteomics Society of India in December 2019. The Workshop included six tutorial lectures and hands-on data analysis training sessions presented by seven speakers. The tutorials and hands-on data analysis sessions focused on workflows for liquid chromatography-mass spectrometry (LC-MS) based on untargeted metabolomics. We review here three main topics from the workshop which were uniquely identified as bottlenecks for new researchers: a) experimental design, b) quality controls during sample preparation and instrumental analysis and c) data quality evaluation. Our objective here is to present common challenges faced by novice researchers and present possible guidelines and resources to address them. We provide resources and good practices for researchers who are at the initial stage of setting up metabolomics workflows in their labs. Complete detailed metabolomics/lipidomics protocols are available online at <a href='https://www.embl.de/mcf/metabolomics-core-facility/protocols/index.html' rel='noopener noreferrer' target='_blank'>EMBL-MCF protocol</a> including <a href='https://www.embl.de/mcf/metabolomics-core-facility/video-tutorials/index.html' rel='noopener noreferrer' target='_blank'>video tutorials</a>.

2020-12-17 | MTBLS1301 | MetaboLights

GNPS - Subset of metabolome from diseased human lung for protocol example

Project description:The files make up a subset of metabolome from diseased human lung and microbial extracts. These files are meant to be used as an example for molecular networking in the GNPS protocols paper, and this example specifically focuses on visualization of quinolone metabolites.

2019-01-24 | MSV000083359 | GNPS

Improving Muslim Women’s Uptake of Cancer Screening (IMCAN)

Project description:The goal of this non-randomised trial is to test how a workshop that includes religiously-tailored messages can help increase the uptake of breast, colorectal and cervical cancer screening among Muslim women in North East England and Scotland. The results of this trial will inform the development of a full-scale randomised-controlled trial. Participants in this study will be asked to take part in a two-hour workshop, deliver either online or in-person.

| 115126 | ecrin-mdr-crc

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data