Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS - 25_09_SICRIT_pools-IEOmics_posneg

ABSTRACT: SICRIT measurements of different biological matrices in dilution series and with iterative exclusion

INSTRUMENT(S): Orbitrap IQ-X

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

SUBMITTER: Gunda Koellensperger

PROVIDER: MSV000099125 | GNPS |

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

25_09_SICRIT_pools-IEOmics_posneg

Project description:SICRIT measurements of different biological matrices in dilution series and with iterative exclusion

| MSV000099125 | MassIVE

GNPS - 25_09_ESI Pool measurements of biological matrices

Project description:ESI-MS measurements of different biological matrices. Part of comparative dataset to MSV000099125

| MSV000099140 | GNPS

25_09_ESI Pool measurements of biological matrices

Project description:ESI-MS measurements of different biological matrices. Part of comparative dataset to MSV000099125

| MSV000099140 | MassIVE

dia-PASEF HeLa dilution series 0.2ng - 200ng on Bruker timsTOF Pro 2

Project description:Different sample preparation methods were tested for HeLa proteome analysis. A sample obtained using sodium deoxycholate-based lysis allowed identification of the highest number of proteins. For this sample, a dilution series was acquired in triplicates ranging from 0.2ng to 200ng. All measurements were performed on Bruker timsTOF Pro 2 operated in dia-PASEF mode and analysed library-free using DIA-NN 1.8.

2022-06-20 | PXD029836 | Pride

Project description:TP53-mutated dilution series

| PRJNA421179 | ENA

Project description:Mock microbial community dilution series

| PRJNA482674 | ENA

The human spermatozoa proteome

Project description:The human spermatozoa proteome was in depth characterized using shotgun iterative GeLC-MS/MS method with peptide exclusion lists.

2015-07-16 | PXD002367 | Pride

Targeted inhibition of human breast cancer cell lines selected as model systems of ERBB2-positive/EGFR high breast cancer [RPPA-SKBR3]

Project description:EGFR-inhibition is required for targeted therapies of ERBB2-positive/EGFR high breast cancer. Approximately 30% of human ERBB2-positive breast tumors also express EGFR. Three targeted therapeutics (erlotinib, pertuzumab, trastuzumab) and two ligands (EGF, HRG) were analyzed in all possible combinations. Each experiment involving inhibition with targeted drugs was performed in three, and measurements without inhibitors were performed in five biological replicates. This resulted in 780 samples. Incubation with therapeutics only and dilution series of control lysated were included as controls.

2012-10-22 | E-GEOD-36326 | biostudies-arrayexpress

Targeted inhibition of human breast cancer cell lines selected as model systems of ERBB2-positive/EGFR high breast cancer [RPPA-HCC1954]

2012-10-22 | E-GEOD-36324 | biostudies-arrayexpress

Immunocompetent models of brain parenchymal and leptomeningeal metastasis

Project description:Using iterative in vivo selection strategy, we generated a series of mouse metastatic lines with increased tropism for brain parenchyma or leptomeninges, to faithfully recapitulate the hallmarks of human disease.

2023-03-27 | GSE221358 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data