Marker for type VI secretion system effectors

ABSTRACT: Data from PeptideAtlas, [[http://www.peptideatlas.org/PASS/PASS00442 PASS00442]]. File: QEX1_C01215_R3.mzml. From PeptideAtlas: {{i}} Vibrio parahaemolyticus cells were grown in minimal media (M9 + 3% NaCl) with addition of 5 uM phenamil (to simulate growth on surface) for 5 hours in triplicates, and secreted proteins were precipitated from the media, ran on a gel (10 mm) and excised. Two strains were used: R = POR1 delta:opaR (T6SS1 +) and H = POR1 delta:opaR delta:hcp1 (T6SS1 -). Triplicate samples were analyzed for R and H. The goal of this experiment is to identify proteins that are secreted from ... R and not from the ... H. These are potentially effector proteins that are secreted via the type VI secretion system 1 (T6SS1). {{/i}}

INSTRUMENT(S): Instrument

ORGANISM(S): Vibriophage_vp4_uid15449,vibriophage_vpv262_uid14316,vibrio_phage_fs1_uid14227,vibrio_phage_fs2_uid14088,vibrio_phage_k139_uid14144,vibrio_phage_kappa_uid28503,vibrio_phage_ksf_1phi_uid14562,vibrio_phage_kvp40_uid14416,vibrio_phage_n4_uid42785,vibrio_phage_vejphi_uid38367,vibrio_phage_vf12_uid14385,vibrio_phage_vf33_uid14384,vibrio_phage_vfo3k6_uid14093,vibrio_phage_vfo4k68_uid14094,vibrio_phage_vgjphi_uid14279,vibrio_phage_vhml_uid14234,vibrio_phage_vp2_uid14473,vibrio_phage_vp5_uid14382,vibrio_phage_vp882_uid18851,vibrio_phage_vp93_uid37885,vibrio_phage_vsk_uid14337, Vibrio_parahaemolyticus_rimd_2210633

DISEASE(S): Not Available

SUBMITTER: Salomon D, et al.  

PROVIDER: GPM32320000099 | GPMDB |

REPOSITORIES: GPMDB