Proteomics

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Utilizing artificial intelligence system to build the digital structural proteome of reef-building corals


ABSTRACT: Reef-building corals play an important role in the marine ecosystem, and analyzing their proteomes from a structural perspective will exert positive effects on exploring their biology. Here we integrated mass spectrometry with newly published AI systems to obtain digital structural proteomes of dominant reef-building corals.

ORGANISM(S): Montipora Foliosa Acropora Muricata Pocillopora Verrucosa

SUBMITTER: Zuhong Lu  

PROVIDER: PXD034973 | iProX | Thu Jun 30 00:00:00 BST 2022

REPOSITORIES: iProX

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Publications

Utilizing an artificial intelligence system to build the digital structural proteome of reef-building corals.

Zhu Yunchi Y   Liao Xin X   Han Tingyu T   Chen J-Y JY   He Chunpeng C   Lu Zuhong Z  

GigaScience 20221101


<h4>Background</h4>Reef-building corals play an important role in the marine ecosystem, and analyzing their proteomes from a structural perspective will exert positive effects on exploring their biology. Here we integrated mass spectrometry with newly published ColabFold to obtain digital structural proteomes of dominant reef-building corals.<h4>Results</h4>Of the 8,382 homologous proteins in Acropora muricata, Montipora foliosa, and Pocillopora verrucosa identified, 8,166 received predicted str  ...[more]

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