Comparative Analysis of Soybean Seed Proteome Based on Different Mass Spectrometry Acquisition Strategies

ABSTRACT: This study established a soybean seed proteome database and analyzed the raw mass spectrometry data of BoxCar and DIA on MaxQuant based on this database. Subsequently, the three mass spectrometry acquisition strategies, DDA, DIA and BoxCar, were compared for their depth of protein identification, data stability, and effectiveness of their use in differential proteomics.

ORGANISM(S): Glycine Max

SUBMITTER: Yang Zhao  

PROVIDER: PXD052278 | iProX | Thu May 16 00:00:00 GMT+01:00 2024

REPOSITORIES: iProX