Proteomics

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Pan-analysis of Single Amino-acid Polymorphism


ABSTRACT: Uncovering dark mass in population proteomics: Pan-analysis of Single Amino-acid Polymorphism (Pan-SAP) revealed quantitative relevance with cognition and aging

ORGANISM(S): Homo Sapiens

SUBMITTER: Rong Zeng  

PROVIDER: PXD059327 | iProX | Tue Dec 31 00:00:00 GMT 2024

REPOSITORIES: iProX

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Uncovering dark mass in population proteomics: Pan-analysis of single amino acid polymorphism relevant to cognition and aging.

Gao Xiaojing X   Yin Yuanyuan Y   Chen Yiqian Y   Lu Ling L   Zhao Jian J   Lin Xu X   Wu Jiarui J   Li Qingrun Q   Zeng Rong R  

Cell genomics 20250130 2


Human proteome data across populations have been analyzed extensively to reveal protein quantitative associations with physiological or pathological states, while the single amino acid polymorphism (SAP) has been rarely investigated. In this work, we introduce a pan-SAP workflow that relies on pan-database searching independent of individual genome sequencing. Using ten cohorts comprising 2,004 individuals related to cognition disorder and aging, we quantify the SAP sites in key proteins, such a  ...[more]

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