Proteomics

Dataset Information

0

Ago3 interaction proteins in BmN4 cell


ABSTRACT: We prepared BmN4 cell lysates in Co-IP buffer [30 mM HEPES-KOH pH 7.3, 150 mM potassium acetate, 5 mM magnesium acetate, 5 mM dithiothreitol, 0.1% (w/v) NP-40 and cOmplete ULTRA EDTA-free protease inhibitor (Roche)] with and without 1 mM EDTA and conducted immunoprecipitation assays using anti-Ago3 antibody. The reaction was terminated by boiling with SDS sample buffer.

ORGANISM(S): Bombyx Mori

SUBMITTER: Mikiko C. Siomi 

PROVIDER: PXD023467 | JPOST Repository | Fri Jan 08 00:00:00 GMT 2021

REPOSITORIES: jPOST

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Publications

DEAD-box polypeptide 43 facilitates piRNA amplification by actively liberating RNA from Ago3-piRISC.

Murakami Ryo R   Sumiyoshi Tetsutaro T   Negishi Lumi L   Siomi Mikiko C MC  

EMBO reports 20210208 4


The piRNA amplification pathway in Bombyx is operated by Ago3 and Siwi in their piRISC form. The DEAD-box protein, Vasa, facilitates Ago3-piRISC production by liberating cleaved RNAs from Siwi-piRISC in an ATP hydrolysis-dependent manner. However, the Vasa-like factor facilitating Siwi-piRISC production along this pathway remains unknown. Here, we identify DEAD-box polypeptide 43 (DDX43) as the Vasa-like protein functioning in Siwi-piRISC production. DDX43 belongs to the helicase superfamily II  ...[more]

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