Proteomics

Dataset Information

Comparison of efficacy in immunopeptide identification from HCT116 by "without" FAIMS

ABSTRACT: HLA class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos without FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR thresholds by searching against a randomized decoy database using Proteome Discoverer 2.4 (Sequest HT).

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Koji UEDA 

PROVIDER: PXD023770 | JPOST Repository | Sat Aug 20 00:00:00 BST 2022

REPOSITORIES: jPOST

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Dataset's files

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Action DRS
191206_HCT116_HLAp_1ul(5e6)_1_PepGr.xlsx Xlsx
191206_HCT116_HLAp_1ul(5e6)_2_PepGr.xlsx Xlsx
191206_HCT116_HLAp_1ul(5e6)_3_PepGr.xlsx Xlsx
191206_HCT116_HLAp_1ul_Replicate1.raw Raw
191206_HCT116_HLAp_1ul_Replicate2.raw Raw
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