Proteomics

Dataset Information

Global identification of HCT116 immunopeptides by FAIMS-assisted immunopeptidomics

ABSTRACT: HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR thresholds by searching against a randomized decoy database using Proteome Discoverer 2.4 (Sequest HT).

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Koji UEDA 

PROVIDER: PXD023773 | JPOST Repository | Sat Aug 20 00:00:00 BST 2022

REPOSITORIES: jPOST

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Dataset's files

Source:
Action DRS
200205_HCT116_5ul_CVSet1.raw Raw
200205_HCT116_5ul_CVSet2.raw Raw
200205_HCT116_5ul_CVSet3.raw Raw
200205_HCT116_HLAp_5ul_CVSet1_PepGr.xlsx Xlsx
200205_HCT116_HLAp_5ul_CVSet2_PepGr.xlsx Xlsx
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