Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Raf36_Phosphoproteome_Raw_Data

ABSTRACT: Phosphopeptide abundances in 2-week-old Arabidopsis wild-type(Col-0), raf36-1 or raf36-2 seedlings under optimal growth conditions. Data were obtained from three independent biological replicates.

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

SUBMITTER: Taishi Umezawa

PROVIDER: PXD060507 | JPOST Repository | Tue Apr 21 00:00:00 BST 2026

REPOSITORIES: jPOST

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	230722_Col-0_rep2.raw	Raw
	230722_Col-0_rep3.raw	Raw
	230722_raf36-2_rep2.raw	Raw
	230724_Col-0_rep1.raw	Raw
	230724_raf36-1_rep1.raw	Raw

Items per page:

1 - 5 of 11

Similar Datasets

B1Raf_Phosphoproteome_Raw_Data

Project description:(1) Phosphopeptide abundances of group B-Rafs, SnRK2s or SnRK2 substrates in the aerial parts of soil-grown Arabidopsis wild-type (Col-0) seedlings with/without water supply for indicated periods. Data were obtained from three independent biological replicates. (2)Phosphopeptide abundances in 2-week-old Arabidopsis wild-type (Col-0) seedlings treated with/without dehydration on the filter paper for 30 min. Data were obtained from three independent biological replicates. (3) Phosphopeptide abundances in 2-week-old Arabidopsis wild-type (Col-0), raf13-1raf15-1 or ireh1-2 seedlings under optimal growth conditions. Data were obtained from three independent biological replicates.

2024-12-24 | PXD040996 | JPOST Repository

Arabidopsis ABA Phosphoproteome Raw Data

Project description:Phosphopeptide abundances in 2-week-old Arabidopsis wild-type (Col-0) shoot or root under 50uM ABA treatment for 0, 15, 30 and 90 min. Data were obtained from three independent biological replicates.

2026-01-29 | PXD071704 | JPOST Repository

Col-0_srk2dei_abi1-1C_ABA_phosphoproteomics

Project description:Phosphopeptide abundances in 2-week-old Arabidopsis wild-type (Col-0) , srk2dei and abi1-1C under 50uM ABA treatment for 0, 15, 30 and 90 min. Data were obtained from four independent biological replicates.

| PXD074230 | JPOST Repository

Oryza sativa_Phosphoproteome_ABA_Raw_Data

Project description:Phosphopeptide abundances in 3-week-old Oryza sativa (japonica) seedlings under 50uM ABA treatment for 0, 15, 30, 90min.

2026-01-29 | PXD071854 | JPOST Repository

Genome-wide transcriptomic analysis of Arabdiopsis mutants controling nuclear size in comparison to the wildtype

Project description:We report genome-wide transcriptomic profile of 2 week-old Arabidopsis seedlings from pwo1 and crwn1 crwn2 mutants in comparison to the wildtype (Col-0)

2019-01-14 | GSE106615 | GEO

Total Proteome Analysis from Arabidopsis thaliana SUMO E3 Ligase Mutants

Project description:Proteomic Analysis of the total proteome from Arabidopsis thaliana SUMO E3 Ligase mutants siz1-2 and mms21-1 and wild-type (Col-0) 8-day old seedlings

2018-04-23 | PXD009274 | Pride

RNA-seq analysis of Arabidopsis ATAF2 loss- and gain-of-function mutants

Project description:Four-day old seedlings of Arabidopsis wildtype Col-0, T-DNA insertional mutant ataf2-2, and overexpression line ATAF2ox-3 were collected for total RNA extraction. Three biological replicates were prepared for each genotype.

2021-04-20 | GSE172328 | GEO

RNA-seq analysis of Arabidopsis plants overexpressing Sclerotinia sclerotiorum effector SsE1-GFP

Project description:Ten-day old seedlings of Arabidopsis wildtype Col-0, and SsE1-overexpressing lines SsE1-GFP-5 and SsE1-GFP-8 were collected for total RNA extraction. Three biological replicates were prepared for each genotype.

2021-01-25 | GSE165401 | GEO

Arabidopsis gene expression profile : Col-0 wild-type vs. pif3pif4pil5pil6 (pifQ) mutant

Project description:Transcriptional profiling of 60h-old Arabidopsis whole seedlings comparing control Col-0 wild-type plants with pifQ mutant plants The expression profile of dark-grown pifQ mutant shows similar pattern of Rc-grown Col-0 wild-type Keywords: Genetic modification

2009-04-23 | GSE14492 | GEO

The interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings

Project description:In this Data Report, we provide an immunoprecipitation (IP)-based analysis of the HDA19 interactome in etiolated Arabidopsis seedlings. We believe that the interactome presented here provides a valuable resource for follow-up research on novel interacting partners of this central protein. The material used for this experiment was derived from hypocotyls of 6-day-old etiolated Arabidopsis seedlings. The dataset contains a total of 6 files, 3 independent biological replicates of each Col-0 (control plants) and 35S::HDA19-GFP plants.

2023-09-19 | PXD045454 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data