Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mouse CASQ2 R33Q/R33Q left ventricular myocardium

ABSTRACT: Multiplexed LC-MS/MS data from CASQ2 R33Q/R33Q mice left ventricular myocardium

ORGANISM(S): Mus Musculus (mouse)

SUBMITTER: Enrique Lara-Pezzi

PROVIDER: PXD079483 | JPOST Repository | Wed Jun 10 00:00:00 GMT+01:00 2026

REPOSITORIES: jPOST

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	CASQ2_ALL.raw	Raw
	CASQ2_ALL_20190331080141.raw	Raw
	CASQ2_FR1.raw	Raw
	CASQ2_FR1_20190331014640.raw	Raw
	CASQ2_FR1_results_FDR.txt	Txt

Items per page:

1 - 5 of 20

Similar Datasets

Proteomic analysis of mouse heart tissue following myocardial infarction

Project description:This project aims to characterize the proteomic changes in cardiac tissue of mice following myocardial infarction and treatment with resibufogenin. Left ventricular tissue samples were collected from mice after left anterior descending coronary artery ligation. Protein extracts were analyzed using LC-MS/MS, and data were searched against the mouse UniProt database. The identified differentially expressed proteins provide insights into the molecular mechanisms of resibufogenin.

2026-03-24 | PXD076128 |

Nuclear Receptor Corepressor 1 (NCoR1) deletion changed the expression profile in cardiomyocytes

Project description:NCoR1 played an important role in regulating the expression of many genes. We were wondering what kinds of genes the NCoR1 would regulate in cardiomyocytes. Therefore we generated the cardiomyocyte-specific NCoR1 knockout mice (CMNKO). Then we tried to analyze gene expression of left ventricular from littermate control (LC) and CMNKO mice with an unbiased way. Therefore the samples from left ventricular were subjected RNA-sequencing.

2019-08-22 | GSE134923 | GEO

Analysis of Left Ventricular Profiles in Carfilzomib Treated and Control Mouse Specimens

Project description:Wild-type C57BL/6N mice were treated with twice-weekly carfilzomib injections for a period of two weeks. Following this treatment, the left ventricular tissues were prepared for tmt-multiplexed mass spectrometry analysis to determine the protein-profiles of the treated hearts as opposed to those of untreated mouse specimens. For more experimental details and procedures, please see the attached methods file.

2023-11-08 | PXD046670 | JPOST Repository

Concurrent Chronic-Plus-Binge Alcohol and Nicotine Vaping Alter Cardiac Ventricular Proteome

Project description:Label-free LC MS/MS proteomics data from left ventricular free wall tissue of male C57BL/6J mice exposed to alcohol, nicotine vaping, combined exposure, or control conditions. Samples were analyzed using an Evosep One LC system coupled to a CaptiveSpray source on a timsTOF Flex MALDI-2 mass spectrometer (Bruker).

2026-01-28 | MSV000100614 | MassIVE

Project description:LC-MS/MS(Lipid metabolomics)

| PRJNA1297903 | ENA

Assessment of miRNA expression levels in an HCM mouse model containing R719W mutation in Myh6 gene

Project description:We compared the expression levels of miRNAs in left ventricular heart tissue from HCM vs WT mice, using gene expression profiling data obtained from RNA-seq.

2024-01-03 | GSE234773 | GEO

Proteomics_LC-MS_MS

Project description:Proteomics LC-MS MS dataset

| EGAD00010001006 | EGA

Mus musculus

Project description:Metabolomics LC-MS dataset

| PRJNA811808 | ENA

rat myocardial left ventricular tissue proteins LC-MSMS

Project description:Rat left ventricular tissue LC-MSMS.Rat left ventricular tissue proteins from different groups were extracted and quantified using the BCA Protein Assay Kit (Thermo Fisher Scientific, USA). The proteins were then labeled with tandem mass tags (TMT). TMT6/10 (Pierce, USA) with different reporter ions (126-131 Da) were applied as isobaric tags for relative quantification. Then the labeled peptide aliquots were combined for fractionation and further LC-MS analysis. The LC–MS/MS analysis was carried out in Capitbalbio Technology by using Q Exactive mass spectrometer (Thermo Fisher Scientific, USA). Twenty most intense precursor ions from a survey scan were selected for MS/MS detected in Orbitrap analyser. All the tandem mass spectra were produced by higher-energy collision dissociation (HCD) method. The MS/MS data was collected and searched against the Oryctolagus cuniculus database using the Sequest algorithms. A protein with fold change≥1.5, and the presence of least 2 unique peptides with a P value <0.05, was considered to be differentially expressed protein (DEP). Finally, DEPs were analyzed by reference to three key databases: Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), Reactome and the Clusters of Orthologous Groups (COG).

2021-07-26 | PXD024641 | Pride

Proteome wide screening for ubiquitination, ISGylation and NEDDylation sites in wildtype and ISG15 knockout mouse hearts after transverse aortic constriction

Project description:Hearts(left ventricles) were harvested from control wildtype and ISG15 knockout mice and wildtype and ISG15 knockout mice 4 weeks after pressure overload induced by transverse aortic constriction. Nano LC-MS/MS analysis was performedon left ventricle tissue following protein extraction, trypsin digestion, peptide desalting, anti K-e-GG enrichment.

2023-05-10 | PXD032267 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data