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JPST000210-1 Phosphoproteomics data of colon tissues (tumor and non-tumor) [Reanalysis: JPST000210]

ABSTRACT: Phosphoproteome analyses of colorectal cancer tissues from 20 patients (20 tumors and 20 tumor-adjacent normal tissues) were carried out using IMAC-based posphopeptide enrichment followed by SCX-RP-MS/MS. The obtained results were searched against UniProt DB by Mascot, and the identified peptides were filtered at 1% FDR thresholds by searching against the randomized decoy DB at peptide level. This dataset with the PX complete submission format will be further used to generate a customized DB in this jPOST project. [Original project description]

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Yasushi Ishihama

PROVIDER: RPXD034739 | JPOST Repository | Sat Mar 25 00:00:00 GMT 2023

REPOSITORIES: jPOST

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			Action	DRS
	121026_CRC_N_Fr01.maxq.txt	Txt
	121026_CRC_N_Fr02.maxq.txt	Txt
	121026_CRC_N_Fr03.maxq.txt	Txt
	121026_CRC_N_Fr04.maxq.txt	Txt
	121026_CRC_N_Fr06.maxq.txt	Txt

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Phosphoproteomics data of colon tissues (tumor and non-tumor)

Project description:Phosphoproteome analyses of colorectal cancer tissues from 20 patients (20 tumors and 20 tumor-adjacent normal tissues) were carried out using IMAC-based posphopeptide enrichment followed by SCX-RP-MS/MS. The obtained results were searched against UniProt DB by Mascot, and the identified peptides were filtered at 1% FDR thresholds by searching against the randomized decoy DB at peptide level. This dataset with the PX complete submission format will be further used to generate a customized DB in this jPOST project.

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JPST000210-2 Phosphoproteomics data of colon tissues (tumor and non-tumor) [Reanalysis: JPST000210]

Project description:Phosphoproteome analyses of colorectal cancer tissues from 20 patients (20 tumors and 20 tumor-adjacent normal tissues) were carried out using IMAC-based posphopeptide enrichment followed by SCX-RP-MS/MS. The obtained results were searched against UniProt DB by Mascot, and the identified peptides were filtered at 1% FDR thresholds by searching against the randomized decoy DB at peptide level. This dataset with the PX complete submission format will be further used to generate a customized DB in this jPOST project. [Original project description]

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Reanalysis dataset of JPST000210

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