Proteomics

Dataset Information

0

Target identification for 11q13 amplicon


ABSTRACT: Proteomic strategy to define therapeutically relevant targets in cell lines that contain the 11q13 amplicon compared to those that do not and to ascertain which genes are amplified at the protein level and, concomitantly, are key drivers for tumor growth and/or maintenance. Furthermore, so called passenger genes that are amplified with driver genes and a manifest on the cell surface can be attractive targets for an antibody â?? drug conjugate approach (ADC).

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

SUBMITTER: Dr Nancy Finkel 

PROVIDER: MSV000080001 | MassIVE | Fri Jul 22 17:30:00 BST 2016

SECONDARY ACCESSION(S): PXD002486

REPOSITORIES: MassIVE

altmetric image

Publications

Quantitative Proteomic Verification of Membrane Proteins as Potential Therapeutic Targets Located in the 11q13 Amplicon in Cancers.

Hoover Heather H   Li Jun J   Marchese Jason J   Rothwell Christopher C   Borawoski Jason J   Jeffery Douglas A DA   Gaither L Alex LA   Finkel Nancy N  

Journal of proteome research 20150729 9


Tumor types can be defined cytologically by their regions of chromosomal amplification, which often results in the high expression of both mRNA and proteins of certain genes contained within the amplicon. An important strategy for defining therapeutically relevant targets in these situations is to ascertain which genes are amplified at the protein level and, concomitantly, are key drivers for tumor growth or maintenance. Furthermore, so-called passenger genes that are amplified with driver genes  ...[more]

Similar Datasets

2015-08-04 | PXD002486 | Pride
2020-06-04 | GSE151751 | GEO
2013-08-30 | GSE40938 | GEO
2016-07-08 | GSE71071 | GEO
2021-03-08 | GSE111637 | GEO
2009-09-02 | GSE17907 | GEO
2013-05-22 | E-GEOD-38207 | biostudies-arrayexpress
2013-05-22 | E-GEOD-38323 | biostudies-arrayexpress
| EGAS00001006034 | EGA
2010-07-17 | E-GEOD-22839 | biostudies-arrayexpress