Proteomics

Dataset Information

0

D vulgaris WT-IPFG07 chemostat comparison

ABSTRACT: Parallel chemostats of Desulfovibrio vulgaris Hildenborough WT and IPFG07 (DsrC low-expression) mutant were sampled over 5 turnovers at steady-state. Extracted proteins were digested with trypsin and peptides were isotopically labeled for quantification using the diDO-IPTL methodology (Waldbauer et al. 2017 Analytical Chemistry).

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Desulfovibrio Vulgaris Str. Hildenborough (ncbitaxon:882)

SUBMITTER: Jacob Waldbauer  

PROVIDER: MSV000083165 | MassIVE | Mon Nov 26 13:02:00 GMT 2018

REPOSITORIES: MassIVE

Json Xml
altmetric image

Publications

Proteomic and Isotopic Response of <i>Desulfovibrio vulgaris</i> to DsrC Perturbation.

Leavitt William D WD   Venceslau Sofia S SS   Waldbauer Jacob J   Smith Derek A DA   Pereira Inês A Cardoso IAC   Bradley Alexander S AS  

Frontiers in microbiology 20190411

Dissimilatory sulfate reduction is a microbial energy metabolism that can produce sulfur isotopic fractionations over a large range in magnitude. Calibrating sulfur isotopic fractionation in laboratory experiments allows for better interpretations of sulfur isotopes in modern sediments and ancient sedimentary rocks. The proteins involved in sulfate reduction are expressed in response to environmental conditions, and are collectively responsible for the net isotopic fractionation between sulfate  ...[more]

Similar Datasets

Proteomics S isotope fractionation and energy availability in D. vulgaris
2021-07-22 | MSV000087869 | MassIVE
Proteomics D. vulgaris WT & DsrC mutants -- respiration & fermentation
2022-10-27 | MSV000090596 | MassIVE
Transcriptomics Nitrate Stress in Desulfovibrio vulgaris Hildenborough
2010-06-22 | GSE20079 | GEO
Transcriptomics Cell wide response to air exposure in Desulfovibrio vulgaris Hildenborough
2007-08-09 | GSE8196 | GEO
Transcriptomics Cell wide response to low oxygen exposure in Desulfovibrio vulgaris Hildenborough
2007-07-01 | GSE7816 | GEO
Transcriptomics Genome-wide RNA sequencing of D. vulgaris respond to CuO nanoparticles exposure
2019-08-01 | GSE101911 | GEO
Transcriptomics Effect of carbon monoxide and the CO sensor CooA on gene expression in Desulfovibrio vulgaris Hildenborough
2012-07-31 | GSE36770 | GEO
Transcriptomics Nitrate Stress in Desulfovibrio vulgaris Hildenborough
2010-06-22 | E-GEOD-20079 | biostudies-arrayexpress
Transcriptomics Cell wide response to air exposure in Desulfovibrio vulgaris Hildenborough
2007-08-08 | E-GEOD-8196 | biostudies-arrayexpress
Transcriptomics Cell wide response to low oxygen exposure in Desulfovibrio vulgaris Hildenborough
2010-06-10 | E-GEOD-7816 | biostudies-arrayexpress