Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Glycome and glycoproteome of Xenopus laevis embyros

ABSTRACT: This dataset includes the files for N-glycoproteome analysis of early and late stage Xenopus laevis embyros, as well as the N-glycome during Xenopus laevis embryogenesis

INSTRUMENT(S): Thermo Fisher Q-Exactive HF, Thermo Fisher Orbitrap Fusion Lumos

ORGANISM(S): Xenopus Laevis (ncbitaxon:8355)

SUBMITTER: Norman J. Dovichi

PROVIDER: MSV000084180 | MassIVE | Wed Aug 07 20:30:00 BST 2019

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Similar Datasets

Xenopus laevis

Project description:Gene expression in Xenopus laevis embryogenesis

| PRJNA174405 | ENA

Comparison of RNA localization during oogenesis within Acipenser ruthenus and Xenopus laevis [Xenopus laevis]

Project description:In this study we analyzed the spatial and temporal localization of maternal transcripts during oogenesis in Xenopus laevis. The occurrence of transcript asymmetry in X. laevis has been described at a global level only in matured eggs, while the establishment of the asymmetry during oogenesis has been described only for a few transcripts. In this model it was discerned that there exist three pathways (early, intermediate, late) for the establishment of the vegetal gradient, while for the animal gradient not much is known for its production. In this study we assessed the temporal establishment of the transcript localization at a global level for Xenopus laevis. We were able to determine that there are many transcripts that show temporal variability in the establishment of their localization. We observed the previously described early, intermediate (predefined) and also late pathways but found more member transcripts within these groups. We also described, perhaps for the first time, an early, intermediate (predefined) and late pathway for the animal genes as well. Additionally, we showed that some maternal transcripts are dynamic during oogenesis with degradation and de novo production being observed. Our study showed that in additional to spatial orientation to the transcripts, there is a strong temporal factor. The discovery of these new temporal profiles should help to better understand the driving forces during embryogenesis.

2022-08-23 | GSE211415 | GEO

Xenopus laevis

Project description:Xenopus laevis

| PRJNA269132 | ENA

Xenopus laevis

Project description:Xenopus laevis microRNA

| PRJNA325782 | ENA

Xenopus laevis laevis

Project description:Xenopus laevis laevis Transcriptome or Gene expression

| PRJNA247381 | ENA

Xenopus laevis embryos and animal caps: Control vs PouV morpholino

Project description:Transcriptional profiling of Xenopus laevis embryos and ectoderm (animal caps) comparing embryos injected with control morpholino with embryos injected with the morpholino mixture PVD2, which knocks down all three Xenopus PouV proteins. Whole embryos (WE) or animal caps (AC) were collected at late blastula (9) or early gastrula (10) stages from Control and PVD2 morphants.

2013-11-12 | GSE47578 | GEO

Xenopus laevis

Project description:Xenopus laevis Raw sequence reads

| PRJNA325560 | ENA

Xenopus laevis

Project description:Xenopus laevis gastrulae microRNA sequences

| PRJNA325824 | ENA

Xenopus laevis

Project description:Xenopus laevis Raw sequence reads

| PRJNA324528 | ENA

Xenopus laevis

Project description:Xenopus laevis Raw sequence reads