Arabidopsis Proteogenomics for identification of Ribo-seq predicted ORFs

ABSTRACT: Proteins were extracted from arabidopsis shoot or root tissue using Trypsin/LysC. 2D fractionation was performed with the first dimension being either SCX or basic reverse phase. Each fraction was then introduced to the MS using low pH reverse-phase chromatography. Resulting spectra were searched using maxquant.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702)

SUBMITTER: Justin Walley  

PROVIDER: MSV000085044 | MassIVE | Mon Mar 02 10:11:00 GMT 2020

REPOSITORIES: MassIVE